| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1125 |
|---|
| Symbol | |
|---|
| ID | 7271042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 1154200 |
|---|
| End bp | 1155012 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643569758 |
|---|
| Product | Methyltransferase type 11 |
|---|
| Protein accession | YP_002466191 |
|---|
| Protein GI | 219851759 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.321869 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.566486 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAA GCATAGCACA CCATGATACC ATCGAACTCG CTGAACGCTA CGACCAGGTC
AGTGAGGGTC AGTACAATAA CGGGCTCACA CTCATTGCAA ACCTGGGCGT GAAGAAAGGA
CAGACCGTAC TGGACATCGG ATGCGGAACC GGCCGGCTGA CATCCCGTGT GGCAAAGATC
GTTGGTGATA CCGGACAGGT CATCGGTATC GATCCATCCA AAGAACGAAT AGAGATTGCC
AGAAGAAATG TTCCGGACTC ACCCAGATCA AATATTTCTC TGGAAATTGG GGATGCGAAT
TCCCTGTATC ACTTCCAAAA CAACAGCTTT GATATTGTCT ACCTCAATAT TGTGTTCCAC
TGGATTGATA ACAAAAAAGA TGCCCTCTCC CAGATTTATC GGGTCCTCAA ACCCGGAGGG
CTTCTGGGGA TCACAACGGG AAACAGGGAT CAGCCACACA CCGTTACGAT CATCGCCGAT
AGGATTCTTA CACAGCCAAA GTATGCGAGG TCTGCACAAC AAGGGAGGGC ATCGAGCAAA
CCGGTCAATG TGCTGGAGAT GGTCTCCCTG TTACATGCTA CCGGCTATTC CATACTGGAT
ATCACCACAG AAAAAGATCC ACGTTACTTT GAAAGTCCTC TCAAATGTCT TGAAGATGTC
GAGGCAAGTA CCAGCGGAAC CTTTCTGTCG AATGTCCCAA AGAACCTGAA GAGATCTGCA
CATGAGGAGA TCCAGACCGA ACTGAATAAA CATGCAACAG TCAGGGGAAT AGAGAATGTG
TACAATACCA TCTTTGTCGT GGCTGAAAAG TAA
|
|---|
| Protein sequence | MIKSIAHHDT IELAERYDQV SEGQYNNGLT LIANLGVKKG QTVLDIGCGT GRLTSRVAKI
VGDTGQVIGI DPSKERIEIA RRNVPDSPRS NISLEIGDAN SLYHFQNNSF DIVYLNIVFH
WIDNKKDALS QIYRVLKPGG LLGITTGNRD QPHTVTIIAD RILTQPKYAR SAQQGRASSK
PVNVLEMVSL LHATGYSILD ITTEKDPRYF ESPLKCLEDV EASTSGTFLS NVPKNLKRSA
HEEIQTELNK HATVRGIENV YNTIFVVAEK
|
|---|
| |