| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1080 |
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| Symbol | |
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| ID | 7270996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1119132 |
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| End bp | 1120961 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643569715 |
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| Product | glutamyl-tRNA(Gln) amidotransferase subunit E |
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| Protein accession | YP_002466149 |
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| Protein GI | 219851717 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2511] Archaeal Glu-tRNAGln amidotransferase subunit E (contains GAD domain) |
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| TIGRFAM ID | [TIGR00134] glutamyl-tRNA(Gln) amidotransferase, subunit E |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.37664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.334038 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTATA AGGCGATCGG GCTGAAGGCG GGGATCGAGA TCCACCAGCA GCTGGACACC
GCCCACAAAC TCTTCTGCAA CTGCCCGACA AGGGTTCGTG CAGTCGACGA ACACAACGGA
GAGTTCCGGC GGTACCTCCG GGCTACCGAG AGTGAGATGG GCGAGATCGA CCGGGCCGCC
GAGGAGGAGA TGAAGCAGGC CCGGTTTTTC ACCTACTATG CCTACGACAC CACCTGCCTG
GTCGAGAACG ATGACGAACC GCCGGCGCCC CTGAACCAGG AGGCGCTCGA TCTCGGGCTA
ACGATCGCCA AACTCTTTGG GATGACGCCG ATCCCGCAGG TGCACATCAT GCGCAAGCTG
GTGATTGACG GTTCCAATAC GAGCGGGTTC CAGCGGACCG GACTTGTGGC GATCGATGGG
ACTCTTCCGA ACGGCGGGAG TATCGAGAGC CTCTGTCTGG AGGAGGAGGC CGCTCAGCGG
GTCGAAGGGC CCATCTTCTC TCTCGATCGG CTCGGGATCC CGCTGGTGGA GATCACCACA
TCGCCGTGTA TGCACACCCC TGATGAGGTG GCCGAGGTGG CCGCGTACAT CGGGATGGTG
CTCCGGTCCA CCGGGCAGGT GAAGCGGGGG ATCGGGACGA TCCGACAGGA CATCAACATC
TCGATCCCAG AGGGGGCCAG GGTGGAGATC AAGGGCGTGC AGGAACTGGA CCTGATTGCC
GAGGTTGTGC GGTGCGAGGT GCAGCGGCAG CAGCAGCTTC TCTGGATTCG GGATACCCTG
ATCGAGCGAA ACGCCTCGAT CGATCCGGTG GTCGAGGACG TGACTGCCCT CTTCAAACAG
ACCGACTCGT CGATCCTCAA GAAGGCGAAG GTGATCCTCG CGATCAGGCT CTTCGGGTTC
GGCGGGCTTG TCGGGCATGA GATCCAGCCT GGTCGCCGGC TCGGCTCAGA GCTCTCCGAC
TATGCGAAGA AATGCGGGGT CGGCGGAATT TTCCACACCG ATGAACTGCC GGCCTATGGA
GTCACCGCCG AAGAGAAGGC AGCCCTGATC GAGCGGATGA AGGCCGGCGA GCAGGACGCC
GTGGTGCTGG TCGCAGCAGA TAAAAAGAAG GCGACCTGTG CGGTCCGGCA GGTGATCAAG
CGGGCAGAGA TGGCGTTCCT CGGGGTCCCC GAAGAGACCC GGAAGATGCT CGAAGAGGGG
TCGAGTGCGT ACATGCGCCC GCTGCCCGGG GCCGCACGGA TGTACCCGGA GACCGATGTG
CTCCCGGTGC CGATCACCGC AGAGACCTGG GACCAGGTCT GTATCCCCGA ACTCCTCTCA
TCACGGGCAG AGCGGTTTCA TCGGGACCTC GACCTGGATG CCGGGCTGGC CCGTCAGATC
GCCTTCTCCG AGCGGCTGCC GCTCTTTGAA CAGGCGGTCG ACGAGGGGTT GAAGCCGACC
CTTTCGGCGC GGACCCTCCT CTCGACGCTG AAGGAGCTCT CCCGTGACGG CGTGGCGATC
GACCGAATCG GGGACGATCA GGTGCTTGCT GTGCTCCACG CCATCGAGGA CGGGAAGGCC
GCGAAGGAGG CGATCGGGGA CCTTCTTCGG GCGCTCGCCG GCGGAACATC CCTCGATTCG
GCTCTCAAAG CGCTCGGTCC ATCTATATCG AAGGACGAAC TTGCCGGGAT TGTTTCGAGG
ATCGTGGGCG AACGAAAGGA GTTTGTCGCA GAACGGGGGA TGGGCGCGCT CGGTCCGCTG
ATGGGGATCG TGATGGAGCA GGTCCGGGGA TCGGTGGACG GTAAGGTCGT CAGCGCCCTT
CTCCGTGAAG AACTGAAGAG GCAGGGGTGA
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| Protein sequence | MDYKAIGLKA GIEIHQQLDT AHKLFCNCPT RVRAVDEHNG EFRRYLRATE SEMGEIDRAA
EEEMKQARFF TYYAYDTTCL VENDDEPPAP LNQEALDLGL TIAKLFGMTP IPQVHIMRKL
VIDGSNTSGF QRTGLVAIDG TLPNGGSIES LCLEEEAAQR VEGPIFSLDR LGIPLVEITT
SPCMHTPDEV AEVAAYIGMV LRSTGQVKRG IGTIRQDINI SIPEGARVEI KGVQELDLIA
EVVRCEVQRQ QQLLWIRDTL IERNASIDPV VEDVTALFKQ TDSSILKKAK VILAIRLFGF
GGLVGHEIQP GRRLGSELSD YAKKCGVGGI FHTDELPAYG VTAEEKAALI ERMKAGEQDA
VVLVAADKKK ATCAVRQVIK RAEMAFLGVP EETRKMLEEG SSAYMRPLPG AARMYPETDV
LPVPITAETW DQVCIPELLS SRAERFHRDL DLDAGLARQI AFSERLPLFE QAVDEGLKPT
LSARTLLSTL KELSRDGVAI DRIGDDQVLA VLHAIEDGKA AKEAIGDLLR ALAGGTSLDS
ALKALGPSIS KDELAGIVSR IVGERKEFVA ERGMGALGPL MGIVMEQVRG SVDGKVVSAL
LREELKRQG
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