Gene Mpal_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1003 
Symbol 
ID7271736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1030296 
End bp1030994 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content54% 
IMG OID643569641 
Productoxidoreductase FAD/NAD(P)-binding domain protein 
Protein accessionYP_002466076 
Protein GI219851644 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0767171 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTTG AGACAACGGT TGCAGAGATC ATCAGAAGAA ACAGTGAAGT GAAGAGTTTC 
CGGTTTCGTC GGCCGGCATC ATTTCAGTTT CTCCCAGGCC AGTTTCTGAT GGTGACGATC
CGTATCAACG GGGAGAAGAA GACCAAATAC TTCTCCATCT CGAGCAGTCC CACTGAAAGT
GAGTATATCG AGTTCACGAA ACGGATCACC TCGCATGAGT TCTCGAAGGC TCTCGACAAC
CTGCAGGTCG GGGAAACGGT TTACCTGAAC GGGCCGCATG GGAAATTCAC CTTCACCGGA
GAGTACCAAA AGGTCGTGAT GATCGCCGGC GGGATCGGGA TCACCCCGTT TATGAGCATG
ATCGGCTACT GCACCGACAA CAGGATCCCC GCCGCGATCA CACTCCTGTA TGGGAACCGA
TCTGAAGAGA GTGCCGCCTT TAAAGAGGAA CTGGCCAATT TTATGCAGAA AAATAGAAAT
CTGCGGATCG TCCACAGCCT CTCACGTCCA GAAGAGACCT GGAAGGGACG ACGCGGGCAT
CTTGACCTCA CTACGATCCG GGAGGAGGTT CCCGATTATC AGGACGCATC CTTCTATCTC
TGCGGCCCCC CTGCTCTCGT CGAAGACCTC GAAAGAGTAC TCCAGGCAGA GGGGATTCCA
GAAGACCGGG TCTATGTCGA GTCCTTCCTG GGGTACTGA
 
Protein sequence
MEFETTVAEI IRRNSEVKSF RFRRPASFQF LPGQFLMVTI RINGEKKTKY FSISSSPTES 
EYIEFTKRIT SHEFSKALDN LQVGETVYLN GPHGKFTFTG EYQKVVMIAG GIGITPFMSM
IGYCTDNRIP AAITLLYGNR SEESAAFKEE LANFMQKNRN LRIVHSLSRP EETWKGRRGH
LDLTTIREEV PDYQDASFYL CGPPALVEDL ERVLQAEGIP EDRVYVESFL GY