| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0766 |
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| Symbol | |
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| ID | 7270507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 779804 |
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| End bp | 781675 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 643569414 |
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| Product | SMC domain protein |
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| Protein accession | YP_002465851 |
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| Protein GI | 219851419 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000557605 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0228262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTTAG AAAAAATCTC CATTTCGGGT TATAAAAATT TTAATGAAAA TTTTGAGATT
TGTTTTTCTT CGGGTCTAAA TGTTCTAGTT GGAGAGAACG GGGTTGGAAA AAGTTCGATT
ATTGATGCAA TTCGGTTAAT ACTTTCAGAA GATGAATACG GACGATCAGG GATTTCTGAG
AAGGATTTTC ATAGACCATT CGTCAAAGAT TCAGTTGCTT CAAATAAAAT TAAAATTGTT
GCTCATTTTG ACGAATTATC TGATTTCGAA GAAATTGCAT TTTTACCTTG GAGAGAAGAC
AAAAATGAGG CTCGGCTTTC ATTGGTGATT GATGACACTC AAAATAATCG AGGACGATAC
AATAGGAAAA TTTGGGGGGG GGTATCGCAA AGTAATCCAT ATGAAAAAGA ACTTGTTGAA
CTGATAAATT GTATTTATTT GCCCCCGTTG AGAGATGCCG AAGCAAAATT ACGCGAAGGC
CGTGGATCCC GTCTAGCACG ATTAATATTG AATTTAAATA AAGAAGAATT TTTAAAAGCA
AAACGAGACG GAAAATCTCT AAAAATTGAA GAAAAAGTGA ATTCATTCTA TAATGATATT
GTAAATGACA AGAATGAACC CATTTTTAAA GCTAATGAAT TGATCAAGAA TAGTCTTAAA
AATGCGATTG GAACTGTCTT TGGGCAAGAT ACCCGAATAC AATTTTCAGA AACAAATATT
AATAGAATTA TTGAAAATCT AAGATTGTTT TTCTTTCCAG AAATAAACCA AAATGGACAA
GAATTCAACT ATAGAAGTCT TGAAGAAAAT AGTTTAGGAT ACAACAATCT GATTTATCTA
GCAACTGTGC TTGCAGAATT AAGACCTATC AAAGAAGTTG AATCCGATGA ACCAGAATTT
TTAAAAATAT TACTTATTGA AGAACCTGAA GCGCATTTAC ATCCTCAATT ACAGATAAAA
TTACTGAAGT ATCTTCAGAA AGAGACAGAA AATTCAAACA TTCAAATAAT TATTACAACT
CACTCTCCTG TACTCGCTTC AGCGGTTTCT ATTGACGCCA TTATTCATTT ATCGTTCAGT
AAAGATAGGA AAACAATTGC CACACCCATT AGAAAATGTG GACTTCCTTC TCCAAGTAAA
GCATTTCTTA CAAGATGGCT TGACGCAACC AAATCAACTA TTTTTTTTGC AAAAGGTGTA
ATATTAGTTG AAGGGATTGC TGAAGCGATG CTAATTCCAG AACTAGCAAA GAGAGTGATA
AAAAAGTATA ATAGTGAATA TAAGACAAAA TTACCTGGAA CTCTGGAAGA ACAGGGAATT
TCTGTGATAA ATATTAACGG AATTAATTTT AAGCATTTCA TGCAACTATT CTGTAATATT
AATGAAGATT CTCAACCCGC ATTTTCAATT CCATTGAGGT GCGTTGGAAT TACTGATAAT
GACCCTCCTT CAAACTCTAC ACATCTAGAA CCAATTGAAG GAAACAACCC GATACTTCAA
TTGGTCAATC GTATAAATAA ATCTGAGAAT TCTCGAATAT TTTCAAATTT AAAAACCTTT
GAATATGACT TGGCATTGGA AGGAGGGAAT CTTACTCCTA TGATCCAAAT ATTCTTAAAA
TGTCTAGATA CGAACGGACC AATTCGGAAA GAGTTCACTG ATTATTTAGA AGTCAAATGG
GAAGACGCTT CCCGTGATAC AAAAGAGATA GTTGCGCAAA AATTACTTCT TCGCATCGAT
TCATCTAAAA TCGGAAAGGG ACGATATGCT CAAGAACTCG CAGATTTATT ATTGAAAGAT
TGTACATCAT TTGAAATTCC TAAATATATC AAAGACGCGA TTAATTGGGT TTGTGAGATA
AAAAATGTCT AA
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| Protein sequence | MFLEKISISG YKNFNENFEI CFSSGLNVLV GENGVGKSSI IDAIRLILSE DEYGRSGISE
KDFHRPFVKD SVASNKIKIV AHFDELSDFE EIAFLPWRED KNEARLSLVI DDTQNNRGRY
NRKIWGGVSQ SNPYEKELVE LINCIYLPPL RDAEAKLREG RGSRLARLIL NLNKEEFLKA
KRDGKSLKIE EKVNSFYNDI VNDKNEPIFK ANELIKNSLK NAIGTVFGQD TRIQFSETNI
NRIIENLRLF FFPEINQNGQ EFNYRSLEEN SLGYNNLIYL ATVLAELRPI KEVESDEPEF
LKILLIEEPE AHLHPQLQIK LLKYLQKETE NSNIQIIITT HSPVLASAVS IDAIIHLSFS
KDRKTIATPI RKCGLPSPSK AFLTRWLDAT KSTIFFAKGV ILVEGIAEAM LIPELAKRVI
KKYNSEYKTK LPGTLEEQGI SVININGINF KHFMQLFCNI NEDSQPAFSI PLRCVGITDN
DPPSNSTHLE PIEGNNPILQ LVNRINKSEN SRIFSNLKTF EYDLALEGGN LTPMIQIFLK
CLDTNGPIRK EFTDYLEVKW EDASRDTKEI VAQKLLLRID SSKIGKGRYA QELADLLLKD
CTSFEIPKYI KDAINWVCEI KNV
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