| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0723 |
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| Symbol | |
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| ID | 7271869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 720044 |
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| End bp | 720643 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643569368 |
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| Product | ThiJ/PfpI domain protein |
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| Protein accession | YP_002465812 |
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| Protein GI | 219851380 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00286561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGAGAGC TTGTGACCAT TCTGTATGAT GAGTTTGAAA CACTGGACGT ATTTGGACCG
ATTGAGATTC TCGGCAGGTT GTCCGATCAT TTCAACCCGC GGTTTTATTC TCTGACCGGG
GGAATCGTCA CCAGTTCCCA GCAGGTTCCG GTGATGACCG GGTCTCTGTC TGATCTGACC
TCCACCCGGT ATGTTCTCCT GATCCCAGGC GGGACGGGGG CGAGGGATCT GGTGAACGAT
GAGACGTTCA TCTCATCTCT TGGATCCCTG GCGGAGCATG CCGAGTTCAT TCTGACCGTC
TGTACCGGTT CGATCCTCCT CTCCCGGACC GGTATTCTGA ATGGGAGGCG TGCCACCTCA
AACAAACGGG TGTTCGCCTG GACGAAGACC GCACCTGGGG TGACCTGGGA AGAGAAAGCC
CGGTGGGTCA GAGACGGGAC CATCTATACC AGTTCGGGTG TCAGCGCCGG CATGGACATG
GCTCTGGGTT TTGTAGCAGA CCTGCTGGGG TCTTCGCTCG CTCACCAGGT GGGCCGGGAG
ATCGAATATG AATGGAACGA GGATTCCGGC CATGATCCGT TCTCTGCTCT CTGCCAGTGA
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| Protein sequence | MRELVTILYD EFETLDVFGP IEILGRLSDH FNPRFYSLTG GIVTSSQQVP VMTGSLSDLT
STRYVLLIPG GTGARDLVND ETFISSLGSL AEHAEFILTV CTGSILLSRT GILNGRRATS
NKRVFAWTKT APGVTWEEKA RWVRDGTIYT SSGVSAGMDM ALGFVADLLG SSLAHQVGRE
IEYEWNEDSG HDPFSALCQ
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