| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0692 |
|---|
| Symbol | |
|---|
| ID | 7271837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 689761 |
|---|
| End bp | 690510 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643569337 |
|---|
| Product | protein of unknown function DUF75 |
|---|
| Protein accession | YP_002465782 |
|---|
| Protein GI | 219851350 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1938] Archaeal enzymes of ATP-grasp superfamily |
|---|
| TIGRFAM ID | [TIGR00161] conserved hypothetical protein TIGR00161 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.343449 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACTATG TTAAACTAAT GTCACCAGAA GCCTTGTATG ATATCAGAAT TATCTCAGAG
CCCATCTCCG GGGACGGGGC CACAATTCTG ATGGGGTTCC CCGGGAGCGG CCTTGTTGGT
TCAATCGCCC TTCAGTATCT GGTCGATCAG AAGGAGTTCA AACAGATCGG GACGATGACC
AGCAAATACT TCCCCCCGTT TGCGATGATG GCGAAGGGTT TGATCAATGT GCCGGTCAGG
ATCTATCAGA AGGATGCGAT CGTCGCTATC GTTGCCGATA TTCCGATCCA TCCGATGATC
TGTTACGAAG TCGCCAACGG ACTGGTGGAC TGGCTGATGC CTTTCCACAT CAAGGAGGTG
GTGGCCCTGG CAGGGGTTGT CACCACGGAC GATCAGAAGA GGGTCTTTGG GATTGCGACC
ACCGAGGAAC TGCTCGAGCG GATCAAGGAT GTGACCGAGT TTCTGCCAGT GGGTTCGATC
TCCGGGATCG CCAGCAGTCT GATGACCGAG TGCAAGATCC GCGGCATCCC GGCGATCGGT
CTGCTGGGTG AGACCGTCAA CGCCCCCGAC CCTCGAGCAG CCGTTGCCTC TCTTGAGGTG
TTGAACCACA TGTACAACCT TGAGGTGGAC ATCCAGCCGC TGCTAGAACA GGCCGATGAG
ATCGAGGCGA CGATGCATAA ACTCGCCGAA GAGGTTCAAT CCTCTGCTGA AGGGCCTCAG
AAGAGAGAAA ATCTACCGAT GTACGGGTGA
|
|---|
| Protein sequence | MHYVKLMSPE ALYDIRIISE PISGDGATIL MGFPGSGLVG SIALQYLVDQ KEFKQIGTMT
SKYFPPFAMM AKGLINVPVR IYQKDAIVAI VADIPIHPMI CYEVANGLVD WLMPFHIKEV
VALAGVVTTD DQKRVFGIAT TEELLERIKD VTEFLPVGSI SGIASSLMTE CKIRGIPAIG
LLGETVNAPD PRAAVASLEV LNHMYNLEVD IQPLLEQADE IEATMHKLAE EVQSSAEGPQ
KRENLPMYG
|
|---|
| |