| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0625 |
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| Symbol | |
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| ID | 7270212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 620224 |
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| End bp | 623283 |
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| Gene Length | 3060 bp |
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| Protein Length | 1019 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643569273 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_002465719 |
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| Protein GI | 219851287 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases
[COG2887] RecB family exonuclease |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.243128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTCA ACCCCGCCCA GCAGACCGCC GTGGAGAACG CCGGCACCCA GCTGATCCTG
GCCGGCCCAG GCTCAGGCAA GACCCGTGTG ATCACCGAGA AGATCCTCCA CCTCCTCGAC
CATGGCGTTC CCCCCACCGA GATCCTCGCC CTCACCTTCT CAGAGAAGGC CGCCGCCGAG
ATGAACGACA GGATCGAGAT GAAACGCCCG AACCTCGACC TGGAGATCCA CACCTTCCAC
TCCTTCTGCC TGGAGGTCCT CCAGGACAAC ATGCTGAGCA GCGGGCTGAA CGTCTCGGGC
GGGGTGATCA GCCGGACCAG CCAGCTCGTC TGGGGGCTGC AGCATATCGA CATCTTCGAC
TTTGAGCACA TCAAACTCGG GAACAACGCG GCCGACGTGA TCGAGGCGGT CATCGATGGG
ATCAGTGCGT TCCGGGACGA ACTGATCGCA CCGGACGAGC TCGACGACTA CCTGACCCAA
AAACAGTCGG TCCAGGTCGA GGAGGCCGAG CAGGAGTACC TACTGCAGCT CGGAGACCTG
CTGAAGGTCT ACCGGGCCTA CGAGCAGTAC AAGCGGGAGC GGAACCTGAT CGACTTCGAC
GATATGATCC ACGGGGCCGT CACCCTCTTT CGATCCGACC CGGCTCTCCG TTCATCGTAC
CGGTCCCGGT TCCGGTACAT CCTGGTCGAC GAGTTCCAGG ACACCAACTA TGCCCAGCTC
CAGCTGATCA AGGAGATCGC CGGCGAAAAC CTCTGCGTCG TCGGAGACGA CGACCAGACC
ATCTACCGGT TCCGGGGCGC CTACCTCACC AACATCAGGG ACTTCAAGCA GTGGGCCGCC
ACCCACACCG AGACCCTCCT CGACCAGAAT TACAGGAACT CAGGCGCAGT TCTCTCCCTT
GCCCTCCAGG TGATGGCCGG CGCACCAGGC CGGAGAGAAA AGGCCCTCTT CACCGAGAAA
GGCGATGGAG AACCGGTCAC CGTCGCCGCC TGCGGGAACG ATGCGGGTGA GGCCGAGTAC
GTGGCAGCCG AGATCGAGAA GCTGGTCGGC ACCCCCTACC ACTCAAGGCA GGACGGAGGA
GACCGACCGC TCGAATACCG CGACTTCACA GTCCTCTGTC GCACGAAGGC AGACGGAAAG
AAGTTCCAGG CCGCCCTGCA GCGGCACGCC ATCCCCTGCG AGTACCAGGC GAACGTGGAC
TTCATGCAGC TGCCGGTCGT CAGGGACATG GTCGCATACC TCCGGATCAT CGACAACCCG
CTGATGGCCG CCGTCCCGCT GAACCGGGTC ATGAAGATCT GCTCCATCCC TGAGACCGTG
GTGCAGAAGA TCAATGCGGC AGCGATAAAG AGGGGTGATG ACGACGATGA CGGCGTCTAT
GAGACGATGC AGGACGCGGC TAGTATCGTC CCTGATCATG CAGAGCCGGT CGGAGAGGTC
GTCCGGATGC TCGCCCCCTT CATCGAGCAG AAGGAGCGGT ACACCCTCCC GGAACTGGTC
CATGCAGTGA TGATGCAGGC CTCCGGGCTG TACCGCTCGG CGCTCACCGA TACGGCAGAC
ATGGTCAGGC TCTACCTCGC GACCTTCCAC GAGATCGTCC TGGAGTTCGA CCGGACGACT
CCCGAGGCGA CCATCCCCGG CCTTCTCCAG TATTTGGAGC TGCTCGGCGC CTTCCCCGTG
GAAGTCGTCA GAGAGCAGAA GGAGGCAGGT GACGCAGTGC AGATCCTGAC CGCCCACAAG
AGCAAGGGGA AGGAGTTCCC GGTGGTCTTC GTCGCAGACC TGGCCAGGGA GAAGTTCCCA
CTCAGGTACA GTCCCAAGCG GTTCCGGGTC CCCGGCGACC TGGCCCGGGG GCTCCGGACC
GGCGACGATG AGAAGGCACT CTTTGTTCAG GAGGAACGCC GGCTCCTGTA CGTCGCGATG
ACCCGAGCCG AGGAGCGGCT GTACCTGACC TATGCGAAGT GGTACGGTGA CAACAAACGT
GAGAGGAAGC CGTCCCCGTT CCTGGAGGAA CTCAACTTCC GGGAGAACCC GCTCATCACG
GTCGTCGAGC CCCCGGCCTG CGCCCCGGCC CTGCCGGTGA CGGCAGGAGA CCCTGTCGAG
GATCTCCGAA CCTCGCTGCA GGAGGAGGTG GTCCGGGCTG TCTCGGAGAT GCGCATCTCC
ACGGCCATCC AGACCCTTGT GACCCTCGAA GGAGTGCGGG AGTACGCAGA GCAGGGTACC
GATGACTTCG ACCGGGACGC CTTCCTCGCG AAAGCAGGGA GCCGGGTCGG GGCCGACACC
AGGATCACAA CCCTCCTCGA CCCGCCCCAC CAGTCGCTCA TCCCACCGAA CTACCGGTTC
TCCGCCTCAG CCCTCTCGAC CTACCAGGAC TGCCCGCTTC AGTTCAAGTT CGCCAACCTC
TACCGGGTCC CGCTGCCCAG GCAGCCCCAG CTGGTCTTCG GTTCCACCCT CCATTCGGTG
ATCGAGCACC TCACCAGGAA CCCCGACCCC TCACAGTCGC TCCGCGACCA GGGGCTCGCA
CTCCTCGAAG AGTACTGGTC CCCAGAGCCG TACGAATCGA AGACCCAGGA GTCGGAGGCC
CACGATTCGG CATCGGCTCT CCTCGACACC TATCTGGCAT GGCAGGCAGG AAACCCAAAT
ACCGTGATCG GGGTCGAGAA GGAGTTCACC TTCTCCTTCG CCGGTCATAG CATCCATGGA
TTTATCGACC GGCTCGAGCA AACTCCGGAC GGAAATTATG TGGTGATCGA CTTCAAGTCA
GGCAAGAAAC CCGACTCCCT CACGAAGAAA GCGGTCGGCG AACATATCCA GCTGAACCTT
TACTCCATGG CTGTCCAGCA GATGTATCAG GTACTCCCGG AGAAGGCCGA GCTCTTCTAC
TTAAAGGATG GAAAACGGGT CTCGTATCTC CCGACCGAGG AGACGATCCA GGTCTTCACT
GGGACACTCA GCACCCTGAT CGGAGGGATC ACCAGGGAAG AGTTTCCACC CAAGTCGGAC
AATCAGAGAT GCCAGTGGTG TGCGTACCGA CCCCTCTGTG GTACAGATCT GAAAGGCTAA
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| Protein sequence | MSLNPAQQTA VENAGTQLIL AGPGSGKTRV ITEKILHLLD HGVPPTEILA LTFSEKAAAE
MNDRIEMKRP NLDLEIHTFH SFCLEVLQDN MLSSGLNVSG GVISRTSQLV WGLQHIDIFD
FEHIKLGNNA ADVIEAVIDG ISAFRDELIA PDELDDYLTQ KQSVQVEEAE QEYLLQLGDL
LKVYRAYEQY KRERNLIDFD DMIHGAVTLF RSDPALRSSY RSRFRYILVD EFQDTNYAQL
QLIKEIAGEN LCVVGDDDQT IYRFRGAYLT NIRDFKQWAA THTETLLDQN YRNSGAVLSL
ALQVMAGAPG RREKALFTEK GDGEPVTVAA CGNDAGEAEY VAAEIEKLVG TPYHSRQDGG
DRPLEYRDFT VLCRTKADGK KFQAALQRHA IPCEYQANVD FMQLPVVRDM VAYLRIIDNP
LMAAVPLNRV MKICSIPETV VQKINAAAIK RGDDDDDGVY ETMQDAASIV PDHAEPVGEV
VRMLAPFIEQ KERYTLPELV HAVMMQASGL YRSALTDTAD MVRLYLATFH EIVLEFDRTT
PEATIPGLLQ YLELLGAFPV EVVREQKEAG DAVQILTAHK SKGKEFPVVF VADLAREKFP
LRYSPKRFRV PGDLARGLRT GDDEKALFVQ EERRLLYVAM TRAEERLYLT YAKWYGDNKR
ERKPSPFLEE LNFRENPLIT VVEPPACAPA LPVTAGDPVE DLRTSLQEEV VRAVSEMRIS
TAIQTLVTLE GVREYAEQGT DDFDRDAFLA KAGSRVGADT RITTLLDPPH QSLIPPNYRF
SASALSTYQD CPLQFKFANL YRVPLPRQPQ LVFGSTLHSV IEHLTRNPDP SQSLRDQGLA
LLEEYWSPEP YESKTQESEA HDSASALLDT YLAWQAGNPN TVIGVEKEFT FSFAGHSIHG
FIDRLEQTPD GNYVVIDFKS GKKPDSLTKK AVGEHIQLNL YSMAVQQMYQ VLPEKAELFY
LKDGKRVSYL PTEETIQVFT GTLSTLIGGI TREEFPPKSD NQRCQWCAYR PLCGTDLKG
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