| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0577 |
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| Symbol | |
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| ID | 7270161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 570349 |
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| End bp | 571590 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643569222 |
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| Product | coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein |
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| Protein accession | YP_002465671 |
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| Protein GI | 219851239 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1035] Coenzyme F420-reducing hydrogenase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.32789 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCAA AAGGCGACAT GGTCCTGGCC TGGACCACCA ATGCAGACCT ACAGAAGAAA
GCAGAGTGTG GGGGTGCAGT CACCGCTCTT CTCAAATATG CACTTGAAAA CAAGATCGTC
GATGCAGTGC TGACCGTGCA GAGAGGGGTT GACCTCTATG ATGCCCAGCC AGTCCTGATC
ACGAACCCCG AAGACCTGAA CAACACGGCA GGTTCCCTCC ACTGCGGAAC GCTCCTGCTC
TCCAAGTTGA TCAAGAAGTA CCTCGACGGC GCCAGCGACA TGAAACTCGG TGTCACCGTC
AAGGGCTGCG ACATGATGGG GATATACGAA CTGGCCAAGC GCAAGCAGAT CAACCTCGAC
AATGTCACCA TGATCGGGGT GAACTGTGGC GGCTCAGTAA GCCCGGCCCT CGCACGCACG
ATGATCCGTG AGAAGTACGA AGTCGACCCG AACGACGTTA AAAAGGAGGA GATCGACAAG
GGACAGTTCA TCATCGAAAC TGAGGAAGGT CACAAAGGTA TCGCCATGGA CATCCTTGAG
GATGAGGGTT TTGGCCGCAG GACCAACTGT CGCCGCTGCA AGCTGAAGGT CCCCCGCCAG
GCAGACCTCG CCTGCGGAAA CTGGGGTGTT ATTGGCGACA AGGCAGGCAA GGCCACCTTC
GTCGAAGTCT GCAGCCAGAA GGGCGCAGAC CTCCTCACCA GGGCAGAGCA GGCAGGCGCC
ATCGCCACCG AGCCGGCCCC AGCAAAGGGG ATCGAGATCC GGGGAAAGAT CGAGGGCGCC
ATGCTGAAGC TCGGCGACAA GTGGCGAGCA AAGGACTTCA CCGAACTCGG TCAGGGACAG
ACGCGGCTCG AAAAGATCAT GAAGGCAACC GCACGCTGCA TCAAGTGCTA CTCATGCATC
GAAGCCTGCC CGATCTGTTA CTGCGTGGAC TGCTCAACAA AGAACCCGGC ACTGGTCACT
CCAGGAGAGA TCCCACCGAA CTTTATGTTC CACCTGATTA GATACGCACA TATATCAGAC
TCCTGCGTGA ACTGTGGACA GTGTGAGGAA CTCTGCCCAG CAGAGATCCC GAACGCCCTC
TTCATGCATG CACAGCAGGT CGAGCTAGAA GATCTCTTCG GCCACAAACC GGGTGTCGAC
ATGACACTGC CGATACTGGC ACTGGTCGAA GAGCGTGCAG AGCGCGACCG GCTTGCGAAG
ACCGGCAGCG ACATGATCTA TCTGAACTGT TTCAACAAAT AA
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| Protein sequence | MAAKGDMVLA WTTNADLQKK AECGGAVTAL LKYALENKIV DAVLTVQRGV DLYDAQPVLI
TNPEDLNNTA GSLHCGTLLL SKLIKKYLDG ASDMKLGVTV KGCDMMGIYE LAKRKQINLD
NVTMIGVNCG GSVSPALART MIREKYEVDP NDVKKEEIDK GQFIIETEEG HKGIAMDILE
DEGFGRRTNC RRCKLKVPRQ ADLACGNWGV IGDKAGKATF VEVCSQKGAD LLTRAEQAGA
IATEPAPAKG IEIRGKIEGA MLKLGDKWRA KDFTELGQGQ TRLEKIMKAT ARCIKCYSCI
EACPICYCVD CSTKNPALVT PGEIPPNFMF HLIRYAHISD SCVNCGQCEE LCPAEIPNAL
FMHAQQVELE DLFGHKPGVD MTLPILALVE ERAERDRLAK TGSDMIYLNC FNK
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