Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0558 |
Symbol | |
ID | 7271974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 551392 |
End bp | 553017 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643569205 |
Product | nitrogenase molybdenum-iron protein alpha chain |
Protein accession | YP_002465654 |
Protein GI | 219851222 |
COG category | [C] Energy production and conversion |
COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
TIGRFAM ID | [TIGR01282] nitrogenase molybdenum-iron protein alpha chain [TIGR01862] nitrogenase component I, alpha chain |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000289733 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.238141 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAATAA CTGAAGAACA ACTGGAGGAG ATGCTCAGTC GTTACCCGGA CAAGGTCAAA AAGAACCGGA AGAAGCATCT CATCCTGAAG AACTCAGCCG AGGCCTGTCA GCAGATCGAG GCGAACACCC GGACGATCCC GGGCATCATC TCCCAGCGTG GTTGTGCCTA TGCCGGCTGC AAAGGTGTGG TCGTCGGACC GATCAAGGAC ATGGTACATA TCGTCCATGG TCCAGTCGGC TGCTCATATT ACGCCTGGGG AACCCGGCGA AACAAAGCAC GGGCTGATGA CACGACTCCT CCAGAGAAGG TCTTCACTCC CCTCTGCTTC ACCACCGATA TGCAGGAGAG CGACATCGTC TTCGGCGGGG ACAAGAAACT GGCCAAGATG ATCGACCAGG TTGTCGAGAT CTTCCATCCA CGGGCGGTCT CGATCTGCGC CACCTGTCCA GTCGGTCTGA TCGGTGATGA TATCAATGCA GTGGCGAAGG CCGCTGAAGA GCGGCACGGG ATCCAGGTCC TCTCGTTCAA CTGCGAAGGG TATAAAGGGG TCAGCCAGTC GGCAGGACAC CATATAGCGA ACAACAATCT GATGGAGCAT GTGATCGGAA AGGGAACCGC CGAAAAGAAC CCGGACGATT ATGTGATCAA CATCCTCGGG GAGTACAACA TCGGAGGGGA TGGATGGGAA CTGGAACGGA TCCTAAAGGA TATCGGCTAC ACCCTGAACT GCATCATGAC AGGGGACGCC AGTTATGAGA AGATCCGGAA TCTGCACATT GCCGACCTGA ATCTGGTTCA GTGCCACCGT TCGATCAACT ACATCGCCGA GATGATGGAG ACCAAGTATG GTATCCCATG GCTGAAGGTC AACTTCATCG GGGTCACCGC CACCATGGCC TCGCTCCGCG AGATCGCCCA GTGCTTCAAT GATGAAAAAC TGATCGAACG AACCGAGATG GTGATCGCCA GGGAACTGGC TCGGGTGACC CCCGCATTGG AACAGTACCG GAAGATCTGC CAGGGAAAGA CTGCATTCAT CTTTGTCGGA GGGTCCAGGA GTCACCATTA CCAGGCCCTT CTCCGAGACC TGGGTATGGA CGTGGTGGTC GCAGGTTACG AGTTTGCCCA CCGCGATGAC TATGAGGGAC GGCAAGTGAT CCCAACCATC AAGAGCGACG CCGACTCCAA GAACATTCCG GAACTCCATC CAACCCCAGA CGAGGAGTTA TACCAGGAGG CACATGTCCA CCTGAAGATG TCAAAGGAGA AGTACGACGA ACTATCCAGC AGGATTGCCT TCAACAGTTA CCAGGGGATG ATCCCTGAGA TGAAGGACGG AGAGGTGATC CTGGATGACG CCAACCATCA CGAGGTCGAA GAACTGATCA GGATGATAAA ACCGGATCTC TTCTTCTCAG GAGTCAGGGA CAAGTATATC GTTCACAAGA TGGGTGTCCC GGCGAAACAG ATGCACTCGT ATGACTACAG CGGCCCTTAT GCCGGCTTCA ACGGTTCCCT GATCTTCGCC GAGGACGTGG CGAACGCGCT GGTGACCCCG GCCTGGAAAC TGGTAACGGC ACCATGGGAA GACCAAAACA GATCAAGGAG TGATAGCAAT GCTTGA
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Protein sequence | MSITEEQLEE MLSRYPDKVK KNRKKHLILK NSAEACQQIE ANTRTIPGII SQRGCAYAGC KGVVVGPIKD MVHIVHGPVG CSYYAWGTRR NKARADDTTP PEKVFTPLCF TTDMQESDIV FGGDKKLAKM IDQVVEIFHP RAVSICATCP VGLIGDDINA VAKAAEERHG IQVLSFNCEG YKGVSQSAGH HIANNNLMEH VIGKGTAEKN PDDYVINILG EYNIGGDGWE LERILKDIGY TLNCIMTGDA SYEKIRNLHI ADLNLVQCHR SINYIAEMME TKYGIPWLKV NFIGVTATMA SLREIAQCFN DEKLIERTEM VIARELARVT PALEQYRKIC QGKTAFIFVG GSRSHHYQAL LRDLGMDVVV AGYEFAHRDD YEGRQVIPTI KSDADSKNIP ELHPTPDEEL YQEAHVHLKM SKEKYDELSS RIAFNSYQGM IPEMKDGEVI LDDANHHEVE ELIRMIKPDL FFSGVRDKYI VHKMGVPAKQ MHSYDYSGPY AGFNGSLIFA EDVANALVTP AWKLVTAPWE DQNRSRSDSN A
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