| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0544 |
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| Symbol | |
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| ID | 7271960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 539579 |
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| End bp | 540901 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643569191 |
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| Product | signal recognition particle protein Srp54 |
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| Protein accession | YP_002465640 |
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| Protein GI | 219851208 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0717053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACC GACTCGGGTC GTCGTTGAAG GATGCCCTGA AGAAACTGGC TGGAAAGACG
GTCGTGGATC GGGCGGCGGT CGAGGAACTG GTCAAGGACC TGCAGCGGGC CCTGATCCAA
TCTGATGTGA ATGTCAAACT GGTGATGAAC CTCTCGCAGG CGATCAAGAC ACGATCGCTC
GAAGAGGAGC CCCTGAAAGG GATGGGGGTC CGTGAGCATG TGCTCCGGAT CGTCTACCAG
GAATTGGTGG GGCTGATGGG TCCTGAGGTG GAGGTGACCC TTGGACAGCA GACGATTCTG
ATGGCCGGGT TACAGGGGTC TGGAAAGACT ACCACCACGG CGAAGCTGGC CCGTTACTTT
CAGCGCAAAG GGCTCCGGGT CGCAGTGATC TGTGGGGATA CGTTCCGCCC GGGGGCATAC
CAGCAGATCA GCACCCTCTG TCAGAAGATC AACGTCCCCT GTTTCGGAGA CCCAAACGAG
ACCGATGCGG TAAAGATCGT GACCAAAGGT CTCAAATCGG TTGGTCAGGC CGAGGTGCTG
ATCATCGATA CCCAGGGGCG GCATGCGCTT GAGGAGGGGC TGATTCAGGA GATCGTCGAC
CTGAACACCC TCTCAAAGGC TACGCACCGC TGGCTGGTGA TCGATGCCGC CCTCGGTCAG
CAGGCCAGTG AGCAGGCACG ACGGTTCCAC CAGGCAATCG ATATCGATGG CGTGATCATC
ACGAAGATGG ATGGCACGGC AAAGGGTGGT GGTGCCCTCT CGGCGGTTGC AGAGACGAAG
AGTGGTATTG TCTTCATAGG TTCAGGGGAG ACGATAGAGG ATCTTGAACG GTTTGACCCT
GACGGATTCA TCTCCAGGCT GCTTGGGATG GGAGACTTGA AGGCCCTGGT CGAGCGGGCT
GAAGAGGCGA TCACCACTGA GGATGTCGAT GTAAACTCGA TGCTCCGGGG GAAGTTTACG
CTGCGAGACA TGTACAAACA GCTTGAGGCA GTCAACAAGA TGGGGCCGCT GAAGCAGATC
ATGAGTATGC TCCCGCTCGG AAATGTGGAT ATCCCCAACG ATGTCTATGA GGTGACCGGG
ACGAAGATGG TTCGGTACCG GATCATCATG GACTCGATGA CCAATGAAGA ACTGGACGAT
CCGGCGGTCA TCGGTTCATC ACGAATGCAT CGGATTGCGA CAGGTGCCGG CGCATCCCCT
GACGAGGTGC GCGAACTTCT CCGGTATCAC AAGACAATGC AGCGTGCCCT GAAGGGGATG
CGCGGTGCCG GAGGAAAATT CAATATGCAA CGTATGATGA AGCGTTTCAG TGGGAAGCAG
TGA
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| Protein sequence | MLDRLGSSLK DALKKLAGKT VVDRAAVEEL VKDLQRALIQ SDVNVKLVMN LSQAIKTRSL
EEEPLKGMGV REHVLRIVYQ ELVGLMGPEV EVTLGQQTIL MAGLQGSGKT TTTAKLARYF
QRKGLRVAVI CGDTFRPGAY QQISTLCQKI NVPCFGDPNE TDAVKIVTKG LKSVGQAEVL
IIDTQGRHAL EEGLIQEIVD LNTLSKATHR WLVIDAALGQ QASEQARRFH QAIDIDGVII
TKMDGTAKGG GALSAVAETK SGIVFIGSGE TIEDLERFDP DGFISRLLGM GDLKALVERA
EEAITTEDVD VNSMLRGKFT LRDMYKQLEA VNKMGPLKQI MSMLPLGNVD IPNDVYEVTG
TKMVRYRIIM DSMTNEELDD PAVIGSSRMH RIATGAGASP DEVRELLRYH KTMQRALKGM
RGAGGKFNMQ RMMKRFSGKQ
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