| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0530 |
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| Symbol | |
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| ID | 7271946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 531619 |
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| End bp | 532440 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643569177 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_002465626 |
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| Protein GI | 219851194 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.297775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.967129 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCGCT CTTCCGTTGC GAGCATGTTC TTTCACGAGT CCACGCTCTC TGAAATCTTC
GCCACCGTCG CCGCTTCATC TCTCGATACC ATGGAGTTCT GGCCTGAGAC CCCTTCGTTC
TGGCTCTACG GCATGCCGAT GGACCTGCTG GATAGATGCC GTTCCCTCTA CTCCTCGATG
GATCCGATGA CCGTGCATGT CCCGATCCTC GACCTGAATC CCTGCTCCAT GAATCCCAAG
GTGGCTGCGG CGTCCCGTGA GTATTCAGCG GCTGCTATCA GGTTTGCTGA TCGGATTGGA
GCTGGGGTGG TGACGGTGCA TCCTGGCCGC CGGACAGCTA AGCGACCCCC TGGTCCTGAC
GAGTACACCC GGTTCGAGGT ACTGATCGAT CTGCTCAGAG AGGAGGCCAA CCGGTCCTGG
GTAAGGGTCG CGATTGAGAA TATGGAGAAT AAGGTGAACT ATCTGCTCTG CACTCCAAAG
GCAGTCCGTG CCCTGCTGGA CCGGGAACCC TGGCTGTATT TTACGCTCGA TGTCTCGCAT
GCGATGGGCA CCTCGGTGGA GTCGGTGCTT GAGTACATCG AACTCTGCTC TGATCGACTG
GTCAATGTCC ACCTCTCGCG GAGTGAGAAT GGCGTGATGC ATCTTCCTAT GCAGGGCCAC
CCTGATTCTC AGCGGGTGCT CGAGGCGCTG GCCGAACAGG GGTATCAGGG AAACCTGACT
CTGGAGATCG AGGACCTCCG GTTCGATCAT ACTCTATCAA GGGAGGAGAA GGTCGCGTTA
TTGAATGAGG AAGAGCGTTT CATCGCCCGG TTCTTTGTCT GA
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| Protein sequence | MVRSSVASMF FHESTLSEIF ATVAASSLDT MEFWPETPSF WLYGMPMDLL DRCRSLYSSM
DPMTVHVPIL DLNPCSMNPK VAAASREYSA AAIRFADRIG AGVVTVHPGR RTAKRPPGPD
EYTRFEVLID LLREEANRSW VRVAIENMEN KVNYLLCTPK AVRALLDREP WLYFTLDVSH
AMGTSVESVL EYIELCSDRL VNVHLSRSEN GVMHLPMQGH PDSQRVLEAL AEQGYQGNLT
LEIEDLRFDH TLSREEKVAL LNEEERFIAR FFV
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