Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0476 |
Symbol | |
ID | 7272800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 478425 |
End bp | 479300 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643569122 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_002465573 |
Protein GI | 219851141 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGAGG GAGTCCTTCC GGCAATCGTT ACCCCGTTTC AGAACGATCA TGCCAAGAGC CTCGACCTTT TGGGTCTGCA GTCAAATCTT GCATTCCTGG TCAGTAAAGG TGTCCACGGC GTGGTCCCCT GCGGGTCGAC CGGCGAGTCG GCGACCCTCA GTTTTGAGGA GCATGTCAAG GTAATCGAGG CGACCATCGA AGCGGTTGCA GGGAAGGTTC CTGTTCTCGC TGGAGCTGGT TCGAACAATA CCGATGAGGC GATCCGGTTC ACCAGATCTG CAAAGGATCT CGGCGCCGAC GGTGTGCTGA TCATCAGTCC GTATTACAAC AGGCCCAACC GGTCAGGACT GATCAAGCAT TTTTCAGCCA TCGCTGACCT CGACATCCCT GTTGTTCTCT ACAATGTCCC GAGCAGGACC GGCCAGAACC TCTCACCTGA CCTGGTGGCC GAACTCTCCA GGCACCCGAA CATCGTCGGG ATCAAGGAGG CGAGCGGAAA CATCTCTCAG GTCTCACAGA TCATTGAGGA GACCATGGAC CAGGACTTTA CGGTGATATC CGGCGACGAT GGGATGACCC TGCCGGTGAT GGCACTCGGC GGGGGCGGGG TGATCTCGGT GGCGGCGAAC GTGGAACCCG AGCGGATGGT GGGGATGTAC AGGGCATATA CCGAGGGCGA CTGGGACGAC GCGATCAGCC TTCACTATGA ACTGGCTCCA CTCTTTCGGG CGCTCTTCAT CGATTCCAAC CCGATCCCGG TGAAGAAGGC GATCAACCTC CGGGGCCTTG CATCAGGGCC GCTCAGACTC CCGCTCGATG AACTGGATGC TGAAAAGACT GCTGCACTGA CGGAGGTGTT GAGCACGTAT GACTAA
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Protein sequence | MFEGVLPAIV TPFQNDHAKS LDLLGLQSNL AFLVSKGVHG VVPCGSTGES ATLSFEEHVK VIEATIEAVA GKVPVLAGAG SNNTDEAIRF TRSAKDLGAD GVLIISPYYN RPNRSGLIKH FSAIADLDIP VVLYNVPSRT GQNLSPDLVA ELSRHPNIVG IKEASGNISQ VSQIIEETMD QDFTVISGDD GMTLPVMALG GGGVISVAAN VEPERMVGMY RAYTEGDWDD AISLHYELAP LFRALFIDSN PIPVKKAINL RGLASGPLRL PLDELDAEKT AALTEVLSTY D
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