Gene Mpal_0476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0476 
Symbol 
ID7272800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp478425 
End bp479300 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content58% 
IMG OID643569122 
Productdihydrodipicolinate synthase 
Protein accessionYP_002465573 
Protein GI219851141 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAGG GAGTCCTTCC GGCAATCGTT ACCCCGTTTC AGAACGATCA TGCCAAGAGC 
CTCGACCTTT TGGGTCTGCA GTCAAATCTT GCATTCCTGG TCAGTAAAGG TGTCCACGGC
GTGGTCCCCT GCGGGTCGAC CGGCGAGTCG GCGACCCTCA GTTTTGAGGA GCATGTCAAG
GTAATCGAGG CGACCATCGA AGCGGTTGCA GGGAAGGTTC CTGTTCTCGC TGGAGCTGGT
TCGAACAATA CCGATGAGGC GATCCGGTTC ACCAGATCTG CAAAGGATCT CGGCGCCGAC
GGTGTGCTGA TCATCAGTCC GTATTACAAC AGGCCCAACC GGTCAGGACT GATCAAGCAT
TTTTCAGCCA TCGCTGACCT CGACATCCCT GTTGTTCTCT ACAATGTCCC GAGCAGGACC
GGCCAGAACC TCTCACCTGA CCTGGTGGCC GAACTCTCCA GGCACCCGAA CATCGTCGGG
ATCAAGGAGG CGAGCGGAAA CATCTCTCAG GTCTCACAGA TCATTGAGGA GACCATGGAC
CAGGACTTTA CGGTGATATC CGGCGACGAT GGGATGACCC TGCCGGTGAT GGCACTCGGC
GGGGGCGGGG TGATCTCGGT GGCGGCGAAC GTGGAACCCG AGCGGATGGT GGGGATGTAC
AGGGCATATA CCGAGGGCGA CTGGGACGAC GCGATCAGCC TTCACTATGA ACTGGCTCCA
CTCTTTCGGG CGCTCTTCAT CGATTCCAAC CCGATCCCGG TGAAGAAGGC GATCAACCTC
CGGGGCCTTG CATCAGGGCC GCTCAGACTC CCGCTCGATG AACTGGATGC TGAAAAGACT
GCTGCACTGA CGGAGGTGTT GAGCACGTAT GACTAA
 
Protein sequence
MFEGVLPAIV TPFQNDHAKS LDLLGLQSNL AFLVSKGVHG VVPCGSTGES ATLSFEEHVK 
VIEATIEAVA GKVPVLAGAG SNNTDEAIRF TRSAKDLGAD GVLIISPYYN RPNRSGLIKH
FSAIADLDIP VVLYNVPSRT GQNLSPDLVA ELSRHPNIVG IKEASGNISQ VSQIIEETMD
QDFTVISGDD GMTLPVMALG GGGVISVAAN VEPERMVGMY RAYTEGDWDD AISLHYELAP
LFRALFIDSN PIPVKKAINL RGLASGPLRL PLDELDAEKT AALTEVLSTY D