| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0447 |
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| Symbol | rpl22p |
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| ID | 7272771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 462485 |
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| End bp | 462955 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643569093 |
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| Product | 50S ribosomal protein L22P |
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| Protein accession | YP_002465544 |
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| Protein GI | 219851112 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0091] Ribosomal protein L22 |
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| TIGRFAM ID | [TIGR01038] ribosomal protein L22(archaeal)/L17(eukaryotic/archaeal) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0102501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.42812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGATGG CAGCACGAAT AGCATATTCA AAGGCGGTCG AGGGGGAGAA TGTTGCCAAA
GCAAAGGCAA ATGAGCTCCC CTGCTCACCA AAACATGCGA TCGAGATCGC TAAGTTCATC
AGGCACAAGA AGGTGGATGA GGCGATCGCA TATCTGAACC AGGTCGTCGC ATTAAAGAAG
GCCATCCCGT TCAAGACGTT CAACAGGGAC GTGGCGCACA AGCGCGGACT GGACAAGTGG
GATGCCGGTC GGTTCCCGGT CAAGGCCTCC AAGGGTTACC TGAAGATGCT GGAATCGGTC
AGAAAGAACG CCGAGTACAG TGGCCTCGAC GGTGAGAAAC TCGAGATCAT TCATGTGACC
GCAAATCGTG GCCGTGGACA GAACGCGTTC TTCCCCCGTG CGATGGGTCG GGCAACTCCG
AAGAGAAGAG AGACTGTGAA CCTTGAGATC ATTGTAAGAG AGGTGGAGTG A
|
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| Protein sequence | MKMAARIAYS KAVEGENVAK AKANELPCSP KHAIEIAKFI RHKKVDEAIA YLNQVVALKK
AIPFKTFNRD VAHKRGLDKW DAGRFPVKAS KGYLKMLESV RKNAEYSGLD GEKLEIIHVT
ANRGRGQNAF FPRAMGRATP KRRETVNLEI IVREVE
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