Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0435 |
Symbol | |
ID | 7271461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 452549 |
End bp | 453133 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643569080 |
Product | hypothetical protein |
Protein accession | YP_002465532 |
Protein GI | 219851100 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00412378 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGA ATTTACATTG GAAGGGCCGC TGCCTGTCCG TGCTGCTGGT GCTCCTCCTT GCAGGGGTCT GCATGATTGC AGGCTGCACC CAGGCACCGT CAGGACAAAC GACCAAAGGG GTTCCCGTAA ACACCTCGAT ACAGACACTT GATCCGTCGG CTCTGGTCCC GTTCGTTCCG TCAGCGCCAC AGGGCTGGGT GAACGAGACC GAACCATTCG GGTATACGAT GAATGACAAC AACCAGGGGA TCTCGTACTC TGCAGCATCA GGGTCGTACA CGTATGCGGC CAACAACAGC AGCACTGCAG AGGTGATAAT CCAGGATACC GGCGGTGCAA AGGTCGGTTT CCGTGGACTC TGGGACAATC TGACCGCATC AGAGGGGACA TCAGCCTACA CCAAGTCGGT CGAGGTGAAG GGAAACCCCG CATGGGAGAT CTATGAAGCC CCTGATCGAT ATGCGAGTTG GATCTCTGTT GGGGACCGGT TCATGATCTA TATCGCGGTG AACGGCGGCA GCCGTGCAGA CTTCGACACT TTGACCGATT CGATCAACTA TCAGGGACTT GCTGCCCTGA AGTGA
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Protein sequence | MSQNLHWKGR CLSVLLVLLL AGVCMIAGCT QAPSGQTTKG VPVNTSIQTL DPSALVPFVP SAPQGWVNET EPFGYTMNDN NQGISYSAAS GSYTYAANNS STAEVIIQDT GGAKVGFRGL WDNLTASEGT SAYTKSVEVK GNPAWEIYEA PDRYASWISV GDRFMIYIAV NGGSRADFDT LTDSINYQGL AALK
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