Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0427 |
Symbol | |
ID | 7271453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 443150 |
End bp | 443986 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643569072 |
Product | ABC-2 type transporter |
Protein accession | YP_002465524 |
Protein GI | 219851092 |
COG category | [S] Function unknown |
COG ID | [COG1511] Predicted membrane protein |
TIGRFAM ID | [TIGR01247] daunorubicin resistance ABC transporter membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.469533 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACAG GATTCACAAC CGTCTACTGG CGGGACATGC TCAGATTTGT CAGGTTCAAA GCCCTGCTGA TCTCATCGCT GGTGCAGCCG GCCCTCTGGC TTGCGTTCTT CGGGGTCGCG ATGTCCAGTA ACTTCGACCG GCTGGCCGGG ATGACGCCGG CCTTCCCGGG CGTCGTTCAG GTCGGGTATA TGACCTTCAT CGCCGCCGGC GTGATCGCCA TGACCACCCT CTTCACCAGC CTCTTCGGCG GGATCGTCCT CCTCTTCGAT AAGAACTGGG GGTTGATGCG TGAGATCCTG GCATCTCCGA TGAATCGGAA CAACATCATC ATCGGGATCG GTCTCTCAGG CGTCACCAAG TCGTTCATCC AGGCCATGGT GATCATGCTC TTCGGCCTGC TGCTCGGAGT GAAGTTCTTC GTCGGATACA CCGCAGTCCA GACGATATTT GCAATCCTCG GGATCCTGCT CTTTGTCGGG ATATTCGCCC TCGGATTTCT CTTCCTCTCG GCGTTCATCT CGATGTCGAT GGAGTCCCCG GAGGGACTGC AGGGGGTCAC CACACTGCTG ACGATGCCGA TCTTCTTCGC CTCCAATGCA CTCTACCCGA TCGATGGGTT CCCGGAGATC CTCAAACTCG TCTCCACGGT CAACCCGCTG ACCCTCATGA TCAACGGGAT CCGGTACTTT GCGATCGGCG ACAACTTCAC GGCGATCGGC CTGCACTTCG TCTACACCCC GATGGATATC CTGATCTCAT TCCTCGGGCT GATCGCCTTC GCCATCGCCA CGTTCACCCT CGCCTGGTGG AAGTTCCGGA GAGCGGTCAT CACCTGA
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Protein sequence | MDTGFTTVYW RDMLRFVRFK ALLISSLVQP ALWLAFFGVA MSSNFDRLAG MTPAFPGVVQ VGYMTFIAAG VIAMTTLFTS LFGGIVLLFD KNWGLMREIL ASPMNRNNII IGIGLSGVTK SFIQAMVIML FGLLLGVKFF VGYTAVQTIF AILGILLFVG IFALGFLFLS AFISMSMESP EGLQGVTTLL TMPIFFASNA LYPIDGFPEI LKLVSTVNPL TLMINGIRYF AIGDNFTAIG LHFVYTPMDI LISFLGLIAF AIATFTLAWW KFRRAVIT
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