| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0409 |
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| Symbol | |
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| ID | 7271435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 427276 |
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| End bp | 428679 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643569054 |
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| Product | DNA polymerase II small subunit |
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| Protein accession | YP_002465506 |
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| Protein GI | 219851074 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1311] Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.894742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAGG CCAGCGAGAT TCTGCAACGG TTCATCGAGA CGAAACTGCA GGTCCATCCG
GATGTGGTCA GGTACCTTCA GGAGCAGAAC GATCCGACCC TGGTCGACCA GGTGATCCGA
GACGCTTCAG ACCAGACCGT CGTCGTCTCA CCGGCGGTGA TCCCGAAACT CCGTGCAGAG
CGAGACGGAA CCCGGTTCCT GACTGACCCG GGGCTGGAGG TGCTGGCCGG TATCGCCGGC
ACCTCAGAGG CCGTCACCAG TGTTCACGAT TATGTCCACT ACTTCCGGGA CCGGTACAAC
CAGCTCGGCG GGATCGTTCG GGCCCGGGCT CATGCAATGC CAATCGAGGC GCTGGTGAAG
ACGACCCGAT ACAAACAGCA GGAGTGCACG ATCATCGGGA TGGTCGGAGA CTCCCGGACT
TCGACCAAAG GGCACAAGAT CGTCCAGGTC GAGGACCCGA CCGGGACGAT CGCAGTTCTC
TTCAACAAGA ACCGGCCCGA CTTCTCCGAG GCAGAGCGGC TGATCCCGGA CGAAGTGATC
GGGGTTCGGG GAACCCTGTC GCCTGAAGGG ACGCTCTTCT TCGGGAACCA GCTGATCCGG
CCGGACATCC CGATGAACCA TGCCCCGTTT CTGAGCAAAA CGCCGGGAAG GGCGGTGCTG
ATATCAGATG TGCATGTCGG CTCCAACACC TTCCTTCCTG AGGCCTGGGA CCGGTTCGCC
GCATGGCTCA AGACCGCCGA TGTCTCGTAC CTGCTGATCG CCGGGGACGT TGTGGACGGG
ATCGGGGTCT ACCCCGGCCA GGAGCAGGAA CTGGTCATTC AGAATATCTA TGAACAGTAC
AATGCCTTCG GGGAGATGCT CGCCGAACTG CCGAAGAGGC TGAAGATCGT CGTCTCCCCC
GGTAACCACG ATGTGGTTCG GGGAGCCGAA CCACAGCCGG CCCTCCCAGA CAAGTTCACC
GGTTCGTTCC CGGAGAACTG TACCGTCGTC GAGAACCCGG CATTGATCAG TCTGCAGGGG
GTGCGGGTGC TGATGTATCA CGGTCGGTCG ATCGATGATA TGATCAGCCT GATCCCCGGC
GCCACGTACG AAAATCCGGG GCAGATGATG GAGGAGATGT TGCAGCGGAG GCACCTGGCT
CCGTCGTACG GAAGGAGGAC CCCGATTGCC GCGTCCAAAC TGGACCGGCT GGTGATCAAT
CCGATCCCTG AGATCCTGCT GACCGGCCAT GTCCATATCA TGGGGATCAC CCGGTACCGC
GGGGTGCTCG GGATCAATGC CGGCACCTGG CAGGGGCAGA CCGGATTCCA GAAGCAGATG
AATATCAACC CGACTCCGGC CCGAGCCGTC GAAGTGGATC TTCAGACGCT GGAGTATCAG
GTCCGCGACT TCAACGAGGC CTGA
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| Protein sequence | MLKASEILQR FIETKLQVHP DVVRYLQEQN DPTLVDQVIR DASDQTVVVS PAVIPKLRAE
RDGTRFLTDP GLEVLAGIAG TSEAVTSVHD YVHYFRDRYN QLGGIVRARA HAMPIEALVK
TTRYKQQECT IIGMVGDSRT STKGHKIVQV EDPTGTIAVL FNKNRPDFSE AERLIPDEVI
GVRGTLSPEG TLFFGNQLIR PDIPMNHAPF LSKTPGRAVL ISDVHVGSNT FLPEAWDRFA
AWLKTADVSY LLIAGDVVDG IGVYPGQEQE LVIQNIYEQY NAFGEMLAEL PKRLKIVVSP
GNHDVVRGAE PQPALPDKFT GSFPENCTVV ENPALISLQG VRVLMYHGRS IDDMISLIPG
ATYENPGQMM EEMLQRRHLA PSYGRRTPIA ASKLDRLVIN PIPEILLTGH VHIMGITRYR
GVLGINAGTW QGQTGFQKQM NINPTPARAV EVDLQTLEYQ VRDFNEA
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