| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0331 |
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| Symbol | tfb |
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| ID | 7272635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 356549 |
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| End bp | 357553 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643568983 |
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| Product | transcription initiation factor IIB |
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| Protein accession | YP_002465436 |
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| Protein GI | 219851004 |
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| COG category | [K] Transcription |
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| COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.554084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGAGA TAGAGAAACT ACGAATACTT CAAACCGAGC GCGAGGCCCT GAAGAACCGC
AACAGGGTCA TCGAGCACGA GAAGAAGACT GAGGACCATA CCGAGTCTGT CTGTCCGGAA
TGCAAGAGCC GGCAACTGGT CCATGATTAT GAACGGGCAG AGCTGGTCTG CCAGAACTGC
GGGCTTGTCA TCGACGATGA CTTCATCGAC CGCGGACCAG AGTGGCGTGC ATTCGATCAC
GACCAGCGGA TGAAGCGGTC GAGGGTCGGA GCACCGATGA CCTTCACAAT CCACGACAAG
GGTCTCTCGA CGATGATCGA CTGGAGAAAC CGGGACTCGT ATGGTCGTGC CATCAGCAGT
AAGAACCGGG CCCAGTTGTA CCGGCTCCGG AAATGGCAGC GGCGGATCAG GGTCAGCAAC
GCCACAGAGC GGAACCTTGC GTTTGCCCTG AGCGAACTGG ACCGGATGGC CTCGGCTCTC
GGTCTGCCAA GGAATGTCCG GGAGACGGCC GCTGTCGTCT ACCGTGACGC CGTCGACAAG
AACCTGATCC GTGGTAGATC GATCGAAGGG GTTGCTGCGG CGGCACTATA TGCGGCCTGT
CGCCAGTGCA GTGTCCCGCG GACACTCGAT GAGATCGCCG AGGTTTCGCG TGTCTCCCGT
AAGGAGATCG GCAGAACCTA CCGGTTCATC TCGCGCGAGC TCGGGCTCAA ACTGCTCCCA
ACATCCCCGA TAGACTATGT TCCGCGCTTC TGCTCAGGGC TGACGCTGAA AGGCGAGGTC
CAGAGCAGGG CCGTGGAGAT CCTTCGCCAG GCAGCAGAAC GCGAACTTAC GAGCGGCAGA
GGGCCGACCG GAGTCGCTGC TGCCGCCATT TATATCTCCT CAATCCTCGG GGGCGAACGA
CGCACCCAGC GTGAGGTCGC CGAGGTCGCC GGCGTGACCG AGGTCACGAT CAGGAACAGA
TATAAGGAAC TGGCTGAAAA GTTAGATATC GAGATAATCC TCTAA
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| Protein sequence | MQEIEKLRIL QTEREALKNR NRVIEHEKKT EDHTESVCPE CKSRQLVHDY ERAELVCQNC
GLVIDDDFID RGPEWRAFDH DQRMKRSRVG APMTFTIHDK GLSTMIDWRN RDSYGRAISS
KNRAQLYRLR KWQRRIRVSN ATERNLAFAL SELDRMASAL GLPRNVRETA AVVYRDAVDK
NLIRGRSIEG VAAAALYAAC RQCSVPRTLD EIAEVSRVSR KEIGRTYRFI SRELGLKLLP
TSPIDYVPRF CSGLTLKGEV QSRAVEILRQ AAERELTSGR GPTGVAAAAI YISSILGGER
RTQREVAEVA GVTEVTIRNR YKELAEKLDI EIIL
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