| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0313 |
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| Symbol | |
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| ID | 7272614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 341352 |
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| End bp | 342506 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643568963 |
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| Product | Nucleotidyl transferase |
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| Protein accession | YP_002465418 |
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| Protein GI | 219850986 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.414969 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCAG TTATTCTGGC AGCAGGGGAG GGGACCCGGC TGCGGCCGCT GACCCGGTCG
CGCCCAAAGG CTCTAACCCC GGTTGCAAAT ACCCCGATCA TCGAGTATGT GATCAAAGCG
CTCCAGATGA GCGGGATACG GGATATCATC GTCGTGGTCG GATATCGCAA GGAGCATGTG
ATCAGGTACC TGAACATGCT CGACGTTCAG GTCAGGGTGG TGGTGCAGGA GAAGCAGCTC
GGCACAGCCC ATGCACTGCG GTATGCAGAA CCCTTCCTTG AGGGCGATTT CCTGCTCCTC
TCCGGTGATA ACTACATCGA TCCACGATCG ATCCAGCAGA TGATCAAAGA GAAGAACGCT
GTGCTGGTCA CTGACCACCC CTCCCCCTCG AACTTCGGAG TGGTGATGGT CAAGGACGGG
TATATCTGCG AGATCCGGGA GAAACCAGCC GACGCCCGCG GGTTCATCGT CTCCACCGGC
GTCTATTCGC TGGACCGGTC GTTCTTCAAG TATATCGTCG GAAATGAGAT CCCAGATGCG
TTGCAGGCGA TGCTGAATGC AGGCGAACAG ATCAAAGCGA TCCAGGCGTT CGACTGGCAG
GATGCGATCT ATCCCTGGGA TCTTCTCCAG ATGAACGCAC GGCTCCTGAA GAATATCGAT
GGAACCAGGG CCGGAACGAT CAGCAGAAGC TCCAAACTCT ACGGCCTGAT CCATATAGGG
AAGGGAACCA CCATCGGACC AAACACCTAC ATTCAGGGGC CGGTCTCGAT CGGAAACGAC
TGCCATATCG GACCGAACTG CTGTATTATG CCCAACACCT CGATCGGCTC CCGGGTCACA
GTCGACCCAC TCACCTACCT CGGCAACTCG CTGATCATGG ATGATGTGGT GGTTGGCTCA
CATTCCCGGA TCCTGGATGC AGTGATCGGG GAAGCCTGTA CGCTTCGCGA CCACACCACC
ACCTGGTCCC ATGAGGCCAT CTTTGAACTG GAGCACCAGT TCATGAAGGC CACCTTCGGA
GCGGTCCTCG GTGACCGGGT CAGTTCGGCC CCATTCACAA TCCTCAAAAA CTGCATCATC
GGGAACAATG TCTCGATTGA AGAGGGGAAC ACCACGATAT CAGGCGTGGT CGCAGACAAC
TCGGTGGTGA TATGA
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| Protein sequence | MQAVILAAGE GTRLRPLTRS RPKALTPVAN TPIIEYVIKA LQMSGIRDII VVVGYRKEHV
IRYLNMLDVQ VRVVVQEKQL GTAHALRYAE PFLEGDFLLL SGDNYIDPRS IQQMIKEKNA
VLVTDHPSPS NFGVVMVKDG YICEIREKPA DARGFIVSTG VYSLDRSFFK YIVGNEIPDA
LQAMLNAGEQ IKAIQAFDWQ DAIYPWDLLQ MNARLLKNID GTRAGTISRS SKLYGLIHIG
KGTTIGPNTY IQGPVSIGND CHIGPNCCIM PNTSIGSRVT VDPLTYLGNS LIMDDVVVGS
HSRILDAVIG EACTLRDHTT TWSHEAIFEL EHQFMKATFG AVLGDRVSSA PFTILKNCII
GNNVSIEEGN TTISGVVADN SVVI
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