Gene Mpal_0285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0285 
Symbol 
ID7272585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp317660 
End bp318154 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content62% 
IMG OID643568935 
ProductNUDIX hydrolase 
Protein accessionYP_002465391 
Protein GI219850959 
COG category[L] Replication, recombination and repair 
COG ID[COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.1016 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGTCT ACCGGTCCCG CCGCCTGAGC GTCGAGGAGA AAGAGTTCAG CCTTCCCGAC 
GGGCGCGTGC GCAACTATGT GGTCGTCCAT CCTGGTTCGG CGGTGGCGAT GCTTCCGGTC
ATCGGCGAGG ACTGCCTGTT GATCAGGCAG TACCGATACG CGATCGACGG GTTCCTGTAC
GAGGTGCCGG CAGGGACGAT GGAGCCCGGC GAGACCCCTG TGGAGACAGC CCATCGGGAG
ATGATCGAGG AGACCGGTTT TGCCGCCGGG AAGCTCTCCG CTCTCGGGAC GATTCTCACG
ACCCCCGGTT TCTCCGACGA ACAGATCCAT CTCTTCAAAG CCACCGACCT GACCCCCTCT
TCTCTGTATC CGCAGGATGA AGACGAGGTG ATCGAGGTGG AACGGCTTTC GCTCGCTGCG
GCGTGGATGA TGGTGGTCGA TGGAACGATC ATCGATGCCA AGACGATCTG TATGCTGGCG
CAGTGCCGGG GATGA
 
Protein sequence
MEVYRSRRLS VEEKEFSLPD GRVRNYVVVH PGSAVAMLPV IGEDCLLIRQ YRYAIDGFLY 
EVPAGTMEPG ETPVETAHRE MIEETGFAAG KLSALGTILT TPGFSDEQIH LFKATDLTPS
SLYPQDEDEV IEVERLSLAA AWMMVVDGTI IDAKTICMLA QCRG