| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0196 |
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| Symbol | |
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| ID | 7270967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 226898 |
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| End bp | 228967 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643568849 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_002465306 |
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| Protein GI | 219850874 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.202612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00634005 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTACAA CCGAATCAGA GACACTGAAA TATGTACCCA CCACCTGCCC GTACTGTGGC
GTTGGTTGCG GGCTTAACCT CGTCGTCAAG GACGACAAGG TGGTAGGCGT GGAGCCCTAC
AAGCGGACTC CAGTGAACCA GGGCAAACTC TGTCCAAAGG GTGCAACCTG TTGGGAACAT
GTCCACAGCC CAGATCGACT CACCACCCCA CTGATCAAGA AGGATGGGAA GTTCGTCGAG
GCCTCATGGG ATGAGGCGCT GGACCTGGTC GCGAGCAAGA TGAAGGAGAC CTCAGACAAG
TATGGGCCCC ACGGCTTAGG GTTCCAGGTC TCATGCCGCA CCCCCAACGA GGAGTGCTAC
CTGCTCCAGA AACTGGCCAG GATGGCCTTC AAGACCAACA ACGTCGACAA CTGCGCGAGG
ATCTGCCATG GTCCGTCGGT CGCAGGGCTT TCGCTCTCGT TTGGTTCAGG AGCGGCCACC
AACTCGTTCG CCGACCTGCT CAACACGGAC CTGATCTTCA TGATGGGGTC GAACGCAGTC
GAGGCACATC CACTCGCAGC ACGCAGGATC GTCCAGGCCC ACCAGAAGGG TGCTAAGCTG
ATCGTGGCTG ACCCACGGTA CACCCCGACA GCCAGACTGG CCGACACCTA CCTTCGGTAC
AACCCCTCCA CACACATCGC CCTGCTCAAC TCGATGATGT ACTGGATCAT TAAGGAAGGT
AAGCACGACA CTGCGTTCAT CGAAAAGAGG ACCAAGGGCT TTGAAGACCT GAAGAAGACG
GTGGAGAACT ACGCCGATGC AGAAGCAATC CATGGTGTCC CGCTCGAGAC GGTCAAGAAG
ATCGCCTTCG AGTATGCTGA CGCCAAGAAC GCCGTGATCA TCTACTGCCT CGGGATCACC
GAGCAAACTA CCGGAACAGA CAATGTCCGT TCACTCGGTA ACCTCGCCAT GCTCTGCGGC
AATATCGGCC GGGAGGGTGT TGGTGTCAAC CCATACCGTG GACAGAACAA TGTCCAGGGT
GCCTGCGACA TGGGAGCATA TCCAAACGTA TTCTCAGGAT ATCAAAAGGT TGCAGACCCT
GCAGCACGGA AGAAGATGGA GGAGGCCTGG GGGGTCACCG ACCTGCCAGA CTGGTACGGT
ACCACCCTGA CCGAGCAGAT CAACGCCTGT GGCGACGAGA TCAAGTCCAT GTTCATCTTT
GCCCTGAACC CGGTCGTCAC GTATCCAAAC ACCAACCATG TGATCGAATC CTTAAAGAAA
CTCGACTTCC TGGTGGTTCA GGACATCTTC ATGACCGAGA CCGCTCAGTA TGCCGATGTG
ATCCTGCCAG GGGCATGCTT TGCCGAGAAG GACGGCACAT TCACCAGCGC AGAACGGCGT
GTGAACCGTG TTCGCAAGGC AGTACCACCA CCTGGTGACG CCAAGGCCGA CTGGGAGATC
TTCTCCATGC TCGGACAGAA ACTCGGCTTA AAAGGATTCG AATTCACCTC AGCCGAGGAG
ATCTGGGACG ACATGCGGAA GGTCACCCCT TCGATGTTCG GGATCACCTA CGAGCGGATG
GAGAAGCCGG AGTCTGTACA CTGGCCATGC CCAACGGTCG AGCACCCTGG CACCCCGATC
CTGCACAAGG AACGGTTCGG ATCAGAAGAC GGACTTGGAA CCTTCTTCGG GCTTGAATAC
AGGCAGCCGG CAGAGGTAGC TGACGCTGAG TACCCCTTCA CCTTGATGAC CGGGAGACTG
ATCTTCCATT ATCATTCCCG CTCCCAGACA GGACGGGCAG CAGTGCTGGA CTACGAAGTT
CCAGAAGGTT ATGTCCAGAT CAACCCTGAG GACGCGAAAG AACTCGGGAT CGCAAACGGC
GATAAGGTCC TCCTCAAAAG CAGGAGAGGT GAAGTCGAAT CCCACGCCAG AGTGACCGAC
GAAATTGGCA AGGGCGTTCT TTACATGGCG ATGCACTTTG GAAACGCTTC GGCGAACATG
CTCACCAACA CGGCACTCGA CCCATTATCC AAGATGCCGG AGTTGAAGCA CTGTGGTGTT
TCGATTCAGA AAGTAACGGA GGCGAACTGA
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| Protein sequence | MSTTESETLK YVPTTCPYCG VGCGLNLVVK DDKVVGVEPY KRTPVNQGKL CPKGATCWEH
VHSPDRLTTP LIKKDGKFVE ASWDEALDLV ASKMKETSDK YGPHGLGFQV SCRTPNEECY
LLQKLARMAF KTNNVDNCAR ICHGPSVAGL SLSFGSGAAT NSFADLLNTD LIFMMGSNAV
EAHPLAARRI VQAHQKGAKL IVADPRYTPT ARLADTYLRY NPSTHIALLN SMMYWIIKEG
KHDTAFIEKR TKGFEDLKKT VENYADAEAI HGVPLETVKK IAFEYADAKN AVIIYCLGIT
EQTTGTDNVR SLGNLAMLCG NIGREGVGVN PYRGQNNVQG ACDMGAYPNV FSGYQKVADP
AARKKMEEAW GVTDLPDWYG TTLTEQINAC GDEIKSMFIF ALNPVVTYPN TNHVIESLKK
LDFLVVQDIF MTETAQYADV ILPGACFAEK DGTFTSAERR VNRVRKAVPP PGDAKADWEI
FSMLGQKLGL KGFEFTSAEE IWDDMRKVTP SMFGITYERM EKPESVHWPC PTVEHPGTPI
LHKERFGSED GLGTFFGLEY RQPAEVADAE YPFTLMTGRL IFHYHSRSQT GRAAVLDYEV
PEGYVQINPE DAKELGIANG DKVLLKSRRG EVESHARVTD EIGKGVLYMA MHFGNASANM
LTNTALDPLS KMPELKHCGV SIQKVTEAN
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