| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0174 |
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| Symbol | |
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| ID | 7270945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 202187 |
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| End bp | 203638 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643568832 |
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| Product | colanic acid exporter |
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| Protein accession | YP_002465289 |
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| Protein GI | 219850857 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.83222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.572056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTCC GACAGGTCGC GGTATCTGGA GCAAAATGGA CCTCTGTCTC AGCGGCAGTT
GCAAGCCTGC TGCAGCTGGT GCAATTGGTC GTGCTGGCCA GGGTGCTCAC CCCTGCCGAC
TTCGGACTGA TGGGAATGGT GCTGGTGGTG GTTGGGTTTG CGAACTCGTA TGCCGACATG
GGGGTCTCGC AGGCCCTGAT CTTCCGGCAG GACACCACCC AGGAGGAGCA GTCGAGCCTG
TACTGGCTGA ACGTGATGGC CGGGATCGGA CTCTATCTCC TGATGGTGCT GCTGACCCCG
CTGATCACCG GGTTCTTTGC GCAGCCCTCC CTCGAACAAC TGATCCTCCT GACCTCTCTG
GTCTTTCTGA TCACGCCGTT CGGACAGCAG TTTCAGATCC TGCTTCAGAA GGAACTGATC
TTTGACCGGC TCGCCCAGGT GGAGATCATC GCGACGGTGG CTGGAACGAT GGTGGCGATC
GGGGGAGCCC TGCTCGGTTT CGGGGTACTC TCGCTGGTGG CCGGGGAACT GGCCAATGCA
ACCGTCCGGG CCGCGGTACT GATCGCGATC GGCTGGCGCC GGTGGAGGCC AGCCCTCACC
TTCAGCCCTG CACATCTGCG GGGGTACCTC TCGTTCGGGA TGTATCAGAT GGGAGAGCGG
TCCCTGAACT ACTTCAATAA GAATATCGAC AAGATCCTGA TCGGACGGCT GCTCGGGCCG
GAACTGCTCG GCTTCTATAC ACTCGCCTTC AACCTGATCA TCTACCCGAT CTCGATCATC
AACCCGATCA TCACCCGGGT CTCGTATCCA ATCTTTGCCA AACTGCAGAA CGAGATCGGG
ATGCTCAGGC AGGGATATAT GGAGGTGATG CAGATCCTCG CACTGATCAA CTTCCCGCTC
TTCTTCGGCT TCGCCGTCAC CGCCCCGGTG GTGATCCCGA CCTTCTTCGG ACCCCAATGG
ATGCCGAGCG TGCTGATCGC ACAGATCCTG GCAGGCGTCG GGTTGATCCG CTCGACTGGC
AATCCCGTGG GATCGCTTCT GTACGCCAAA GGACATGCAC GGCTCGGGTT TGTCTGGAAC
CTGATCGAGA TGGTGACACA GGTGCCGGGG GTCGTGCTCG GGGCGTACTT CGGGGGGATG
GTTGGGGTCG CCGTCGCCTG CCTCCTCCTC CAGATCCTGT ACTTTGCGCT CAGTTACTGG
CTGCTGATCA GACGGGTCGT CGGCCCCTGC TGCAGAGAGT ACCTGCAGAG CATGGGGGCG
GCCTGTATGA TGAGCACGGT GATGGCGATC GGGGTCTGGA TCGTCGGATC GATCCTCCCG
GATGAAGCGC TGCTCCTCTC TGCCGGGCTT GAGATCCTGG CCGGGGTACT GATCTATGGG
GTGCTCATCC TCCTCTTCCA GCGGAAGGTC GTCGATGAAA TCTGGCGTGG TATCAGAGGA
CAGCAGATAT AA
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| Protein sequence | MSFRQVAVSG AKWTSVSAAV ASLLQLVQLV VLARVLTPAD FGLMGMVLVV VGFANSYADM
GVSQALIFRQ DTTQEEQSSL YWLNVMAGIG LYLLMVLLTP LITGFFAQPS LEQLILLTSL
VFLITPFGQQ FQILLQKELI FDRLAQVEII ATVAGTMVAI GGALLGFGVL SLVAGELANA
TVRAAVLIAI GWRRWRPALT FSPAHLRGYL SFGMYQMGER SLNYFNKNID KILIGRLLGP
ELLGFYTLAF NLIIYPISII NPIITRVSYP IFAKLQNEIG MLRQGYMEVM QILALINFPL
FFGFAVTAPV VIPTFFGPQW MPSVLIAQIL AGVGLIRSTG NPVGSLLYAK GHARLGFVWN
LIEMVTQVPG VVLGAYFGGM VGVAVACLLL QILYFALSYW LLIRRVVGPC CREYLQSMGA
ACMMSTVMAI GVWIVGSILP DEALLLSAGL EILAGVLIYG VLILLFQRKV VDEIWRGIRG
QQI
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