Gene Mpal_0152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0152 
SymbolileS 
ID7270923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp178702 
End bp181884 
Gene Length3183 bp 
Protein Length1060 aa 
Translation table11 
GC content62% 
IMG OID643568811 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_002465268 
Protein GI219850836 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0198182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAAGG AAGTCACCGG GAGTTACAAC CCCGCTGAAC TCGAGGAGCG GGTGCAGGGA 
TACTGGCATA CACATGAGAC CTTCCGGCAG GTGTTGCAGC GCCATGCCTG TGACCGGCCG
TTCTTCTTCG TCGACGGTCC GCCGTACACC ACTGGTCATA TCCATCTCGG TACCGCCTGG
AACAAGATCA TCAAGGACAG CCTCCTCCGG TTCCACCGGA TGACCGGCAG GAACGTGATC
GCCCGGGCAG GTTACGACAT GCACGGCCTC CCAATCGAGG TGCAGGTGGA GAAGAAACTC
GGGTTCGTCT CCAAGAAGGA TATCGAGCAG TTCGGGATCG AGCGGTTCAT CGAGGAGTGC
CGGAGCTTTG CAGAGACAAA CCGGGACGTG ATGAGCGCCC AGTTCAAGAA GCTCGGGATC
TGGATGGACT TCGACAACCC GTACCAGACC CTGAAACCCT CGTACATCGA GGCGGCCTGG
TGGGCCTTAC AGCAGGCCGA CAAGCGGGGG ATGCTGGAGA TCGGACACAG GGTCGTGAAC
TGGTGCCCTC GGTGCGGGAC CGCCATAGCC GACGCAGAGG TGGAATACTG GGACGAGCAC
GACCCTTCAG TCTTTGTGAA GTTCCCGGTG ACCGGAAAGG AGCATGAATA CCTGGTGATC
TGGACCACGA CCCCCTGGAC GCTCCCGGCC AACGTCGCCG TCGCCGTCCA CCCGGAGATC
ATCTATGCCC GGGTCAGGGC CGTCAGGAAC GGGGTCGAGG AGGTGCTCTG GATCGCCGAG
GATCTGGTGA AACCGGTGTT GAAGAAGGGG CGATACCAGG ACTTCTCGAT CATCTCCACG
CAGAAAGGGA CCGAACTGGT CGGGCTCACC TACACCTCGC CGCTGGTCGA GCAGGTGCCG
GTGCAGGCGA CGGTCGAACA CCGGGTCGTG ACCGCCGACT ATGTCGCGCT TGAGAACACC
GGGCTGGTCC ATATCGCACC AGGCCACGGC TGGGACGATT ACCTGGTCGG GGTGCGGGAA
AAGCTCGCGA TGCTCTGCCC GGTGGACGGT GCAGGCCAGT TCACCCCCGA AGCAGGAATC
TTCGCCGGGC TCCCGGTCAG GGAGGCGAAC GGACAGGTGC TCGAGGCGCT CGGGGATCAC
CTGCTCGCCG AGCAGGAGGT CGTCCACCGG TACGGCCACT GCTGGCGTTG CAAGACCCCG
ATCATCTTCA GGGCCACCGA ACAGTGGTTT TTGAAGATCG TTCAGGTGAA GGAGCAGATG
CTCGAGGAGA TCAAGCAGGT CACCTGGTAT CCCGACTGGG CAGGAAGTGC ACGGTTCGCA
GACTGGGTTG GGGAGGCCCG CGACTGGTGT ATCTCCCGGC AGCGGTACTG GGGGATCCCT
ATCCCGGTCT GGCAGTGCAA TTCCTGTAGA AAGCGGCGGG TTATCGGCAC GATCCATGAA
CTCGAGGAGG CCGGCGGCGT CCCGGTGCCG AACCCACACC GCCCGTACGT GGACCAGATC
ACGATCCCCT GTGAATGCGG GGGAGCGATG CACCGGGTCA AGGACATCTT CGATGTCTGG
TTCGACTCGG CGGTGGCATC CTGGGCCACT CTGGACTTCC CTGCCGAGCA TGATCAGTTC
GACCGCCTCT GGCCGGCCGA CCTGATCATT GAGGGGCAGG ACCAGACCCG CGGATGGTTC
TACTCGCAGC TCGGGGCGTC GACCTGTGCG TTTGACAAGG CCCCGTACAA ACGAGTGCTG
ATGCACGGGT TCGCCCTGGA CGCGGACAGT AAAAAGATGA GCAAGAGCCT CGGCAACATG
ATCACCCCCG AGGAGGTCGT CGCGAAGTAC GGGGTTGATG TACTCAGGTT CTATGTCCTT
TCGGCCAACG CGCCCTGGGA CGACCTGAAG TTCAACTGGG ACGGGGTCAA GACGGTCCAC
CGGACGATCA ATGTGCTCTG GAACGTCTAC CGGTTCCCAC TCACCTATAT GAGCCTCGAT
GGGTTCGTTC CCGAATCTAA TGAAGAGATA TGGAACGGGG AGTATATCAC CAGGCGATAC
GCAGCGATGC CATCAGAGGA CCGCTGGATC ATATCGACGG TCAACTCGCT GGCCGTGACG
GTGACCCAGG CGATGAACGA ATGCACGCTC CATCGGGCGA CCAGGGCGAT CCTCTCGTTC
ATCCTCGAGG ACCTCTCCCG CTGGTATGTG CAGCTGGTCA GGCCCAGGAT GTGGCTGGAA
GGGGAGGATC AGGGTAAGCA GGACGCCTAT GAGACGATGT ATTACGTGAT GCGGAAACTG
CTGGTGCTGA TCGCCCCGTT CGCCCCTCAT ATCGCCGAGA CCTGTTACCA GAACCTGAAA
CAACAGGGGG ATCCGGAGAG TGTCCATATG CTCGACTGGG AGAGTGGAGA CCAGGGACTG
ATCGACAGGA ACCTCGAGGA GGCGACGGCG ATCATCAGGT CGTTCGATGA CGGGGTCGCC
AACGCCCGGC AGGCCGGCAA GCGGAAGCTC CGGTGGCCGG TGGCCGAGTG CGTGGTCGTG
ACGGAAAGTG AAACAGTCGC ATCAGCCATC GAGGCGAACA ACAAGATCTG CAGGTCCCGT
GCGAACAGTC GGATCGTGGC GGTGGCCAGG GGTCGCTGGG ATCGGATCGG CTGGCAGGCT
GAACCGGTGA TGAAGAAGAT CGGCCCGACC TACGGCAGGA ACGGACCGGT TGTCAAGGGA
TTGATCGAGC AGGCGGACGC GGCCTGGCTG AAGGGTGAGA TGGACGCCGG CCGCAAGGTG
GTGCTGACCG ATGCCGCCGG AAACTCCTAC ACGATCACCG GCGCAGAGGT GACCTTCGCC
GAACACCTGC CAGAGAATGT CTTCACTGCC CCGATGCAGG ATGCAACCGT CTACGTGGAC
GTGACCCTCT CGCCAGAACT CGAAGGAGAG GGCTATGGAC GGGAGGTGAC CCGCCGGCTG
CAGGAGATGC GCAGACAGGC CGGGCTGAAG GTCGAAGATC TGATCACCGC CGAGGTCGCC
ATCGCCGACC AGCAGGTCGT CGACCTGGTC CAGCCGTGGA TCAGTCGGAT CAGCGATGAC
GTCCGGGCGA CGGCCCTGAT GATCCATGAC GGTCCTCTCG CTGAGCAGAC CTGGCTGGCC
TCCCAGACCT GGGAGGTCGA AGAGGTCACT ATGACGATGG GCCTCTCAAA GGCCGAGAAC
TGA
 
Protein sequence
MVKEVTGSYN PAELEERVQG YWHTHETFRQ VLQRHACDRP FFFVDGPPYT TGHIHLGTAW 
NKIIKDSLLR FHRMTGRNVI ARAGYDMHGL PIEVQVEKKL GFVSKKDIEQ FGIERFIEEC
RSFAETNRDV MSAQFKKLGI WMDFDNPYQT LKPSYIEAAW WALQQADKRG MLEIGHRVVN
WCPRCGTAIA DAEVEYWDEH DPSVFVKFPV TGKEHEYLVI WTTTPWTLPA NVAVAVHPEI
IYARVRAVRN GVEEVLWIAE DLVKPVLKKG RYQDFSIIST QKGTELVGLT YTSPLVEQVP
VQATVEHRVV TADYVALENT GLVHIAPGHG WDDYLVGVRE KLAMLCPVDG AGQFTPEAGI
FAGLPVREAN GQVLEALGDH LLAEQEVVHR YGHCWRCKTP IIFRATEQWF LKIVQVKEQM
LEEIKQVTWY PDWAGSARFA DWVGEARDWC ISRQRYWGIP IPVWQCNSCR KRRVIGTIHE
LEEAGGVPVP NPHRPYVDQI TIPCECGGAM HRVKDIFDVW FDSAVASWAT LDFPAEHDQF
DRLWPADLII EGQDQTRGWF YSQLGASTCA FDKAPYKRVL MHGFALDADS KKMSKSLGNM
ITPEEVVAKY GVDVLRFYVL SANAPWDDLK FNWDGVKTVH RTINVLWNVY RFPLTYMSLD
GFVPESNEEI WNGEYITRRY AAMPSEDRWI ISTVNSLAVT VTQAMNECTL HRATRAILSF
ILEDLSRWYV QLVRPRMWLE GEDQGKQDAY ETMYYVMRKL LVLIAPFAPH IAETCYQNLK
QQGDPESVHM LDWESGDQGL IDRNLEEATA IIRSFDDGVA NARQAGKRKL RWPVAECVVV
TESETVASAI EANNKICRSR ANSRIVAVAR GRWDRIGWQA EPVMKKIGPT YGRNGPVVKG
LIEQADAAWL KGEMDAGRKV VLTDAAGNSY TITGAEVTFA EHLPENVFTA PMQDATVYVD
VTLSPELEGE GYGREVTRRL QEMRRQAGLK VEDLITAEVA IADQQVVDLV QPWISRISDD
VRATALMIHD GPLAEQTWLA SQTWEVEEVT MTMGLSKAEN