Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0146 |
Symbol | |
ID | 7270917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 172626 |
End bp | 174050 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643568805 |
Product | phosphoesterase RecJ domain protein |
Protein accession | YP_002465262 |
Protein GI | 219850830 |
COG category | [R] General function prediction only |
COG ID | [COG0618] Exopolyphosphatase-related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00331466 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATACTCG GGTGCGGGAG TATTGGCTAC AATGTGATTG AGGAACTGGC CAAGGAGACC TCCAGCATCA GGGTCGTCGA CAGGGACGAG AAGAGGGTCA AGGATCTGCT CGATCAGAAA TATGAGGCTG AAGTTCGGGA TCTGAAGGGC CCGGGACTGC TCGACGGGTT GCCGGTCCCT GACGTGGTCT TTGTCCTCTC GAACGAAAAA GATGCCAACC TTGCGGCGGT TCAGGCCATC AAGGCACGCT ATCCTGGCAC TGAGATCATT GCGCGGGCGA TGGATCCGAC CTCGGTCGGG GTGCTTCAGA ACGCCGGCGC CGAGTTCGTC CTCTACCCGC AGGAGGTGGT GGCCAAGGCG GCGGTGCACC AGATCCGCAG GCTCCATGCG ACGCGGATCG CACAGCGGTT GCAGCATCTC TTTGTGGGCT GGGAGGGGAC GCTTGGGATC GTCACCCATA ACAATCCGGA CCCGGATGCG ATCTCCAGTG CGATGGCGCT CGCAGCGATC GCGCGGGTCT CCAGCGATAA GAAGGTGACC TGTCGGATCC TGTACGAGGG GAACATCGGT CATCAGGAGA ACCGGGCGTT TGTGAACCTG CTCGACATCA AGATGGAGCG GCTCACCCCG GAGGTGCTTC GGGAGTGCAA GTATCTGGCG CTGGTCGACT CGTCCATCCC CGGGGTCAAC AACAGTCTCC CCAAGGGGAC GCACGTGCAC ATTATCATCG ATCACCACCG GGCCGAGGAG AGTGAATCGG TACATGCCGA CTTCATCGAT ATCCGTCCAG GTATGGGGGC CACCGCCTCG ATGATGACCC AGTACCTGCA GGAGATGGAT ATCACCATCG ATAAGAAGCT CGCCACCGGG CTGCTCTATG GGATCCGAGC CGATACTCGT GATTTCCGTA GGAATGTGAC TCCACAGGAC CTCAACTATG TCGCTTTTCT CCTTCCCCTG ACCGATTCCG ATCTGCTCGA CCGGATCATG TCCCCGTCTC TCTCCAAGGA GACGCTGGAC ATCCTCGGCA ATGCGATCAT GAACCGGGTG ATCCGGAGCG GGTACCTCTT CTCCAATGTC GGGTATATCC GGAACCGCGA TGCCCTTCCC CAGGCCGCCG ACTATCTGAT CAACCTCGAA GGGGTGAACA CGGCGCTGAT CTACGGTATC GGGGATACCG GTATCCTCGT ATCAGCGCGG AGCCGGGATG TCCGGATCAA CCTAGGAAAC GTGATCAGCG AGGCGTTCGG TGAGATCGGG GATGCCGGCG GGCATCCGAA CATGGCCGCA GCTGTCATTC CGCTCACCTA CTTTGCGATG GTCGAGAACA AGGAGGCGCT CCTGGCGTTG ATCATCGATC CGATCCTGAA GAGGTTCGAG AACATTGTCG GGCTGGAGAA GCAAGAGGGG AGAAATGATC TTTAG
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Protein sequence | MILGCGSIGY NVIEELAKET SSIRVVDRDE KRVKDLLDQK YEAEVRDLKG PGLLDGLPVP DVVFVLSNEK DANLAAVQAI KARYPGTEII ARAMDPTSVG VLQNAGAEFV LYPQEVVAKA AVHQIRRLHA TRIAQRLQHL FVGWEGTLGI VTHNNPDPDA ISSAMALAAI ARVSSDKKVT CRILYEGNIG HQENRAFVNL LDIKMERLTP EVLRECKYLA LVDSSIPGVN NSLPKGTHVH IIIDHHRAEE SESVHADFID IRPGMGATAS MMTQYLQEMD ITIDKKLATG LLYGIRADTR DFRRNVTPQD LNYVAFLLPL TDSDLLDRIM SPSLSKETLD ILGNAIMNRV IRSGYLFSNV GYIRNRDALP QAADYLINLE GVNTALIYGI GDTGILVSAR SRDVRINLGN VISEAFGEIG DAGGHPNMAA AVIPLTYFAM VENKEALLAL IIDPILKRFE NIVGLEKQEG RNDL
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