| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0079 |
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| Symbol | |
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| ID | 7272249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 85636 |
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| End bp | 88365 |
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| Gene Length | 2730 bp |
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| Protein Length | 909 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643568737 |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_002465196 |
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| Protein GI | 219850764 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.130581 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTCATG TACTCTACGT CGATGATGAA TCGGACCTGC TGAACTTGGG GAAGATCTTC
CTGGAGCAGT CACATCAGAT CACCATAGAT ACTGCAACGT CAGCAGAGGA TGCATTGACC
TGCGGGAACC TCCAGACCTA CGATGCCGTC ATCTCCGACT ACCAGATGCC CGGGATGAAC
GGGATCACCT TCCTCAAAGA GGTCAGGTCC CGGTACAGAG ACCTCCCTTT CATCCTCTTC
ACCGGACGGG GGCGAGAGGA GGTGGTGATC GAGGCGATCG ACAGCGGAGT GGATCACTAT
GTCCAGAAGG GCGGGGACCC CCGCCCCCAG TTCGCCGAGC TGGAGCACCG GGTTCTGCAG
GCCATCGAGG CCCGGCAGGG TAAAGTGGCA TTGCAGGAGA GCGAGGAGCG GTTCCGATCC
CTCTTCACTT CGATCTTCAA TGGTTTCGCC CACCATCAGA TCATCTGTGA TGCCGAAGGC
AGGCCGGTGG ATTACCGGTT CATCGATGTC AATCCGGCGT TCGAACGGTT GACCGGGCTG
AAAAGGAACG AGATTCTTGG AAAGACCGTG CTGGAGGTGC TTCCGGATAT CGAACCGTTC
TGGATCGAAC GCTACGGCAG AACAGCACTC ACCGGGAAGT CCCAGTCATT TGAACAGTTC
ACCGCGGCCC TGAACAGATA TTATGAAGTG ACGGTCTATA GCCCCCGTCC CGGAGAGTTC
ACCACCCTCT TCTCCGATAT CACCAGTCAG AAGCAGGCAG AGGAGATCCT CAGGGAGAGA
GAGACTAAAT TCCGAACGAT AGTGGAGACG TCGCCTGACA TGATCTGGGA GATCGACACC
CGGGGGATCT TCACCTATCT GAGTCCGCAG ATTGGAGATA TTCTCGGTTA TTCCACTGAG
GAGATGCTCG GAAAACCGAT TCTCTTCCTT ATAATCCCCA GTTTTATTCC CACGGTGCAG
AAGATCCTCG GCTCACACCT GCAGAGCAGG GAGGAGATCA ATACCTTCGA AGTCCCGGCG
CATCATGCCG ATGGGACGCC ACGCAGTATC GAGATCCGCT CTGCAAAGAT CAGGGATAAG
ACCGGACAGG TCACCGGATT CCGGGGTATT GCCCGGGATG TCACCGAACG GAGACGGGCG
GAGGAGGAAC TCAAGGAGAG CGAAGCGAGT TACCATGGCC TCTTCAACAC CATCCGACAG
ACGATCTTCA TCCTGGATCA GAAAGGGAGG TTTCTTGATG CGAATGATGG TGCGGTGTCG
ATGTACGGCT ATCCCCGGGA GGCATTCCTC GGGAGATATC CAGAGTTCCT CTCGGCTCCG
GGCATGAATG ATCTGAAGAA GATTGAGGAA CTGATCCAGA AGGCGTTCAC TGGAGAGCCA
CAGCAGATAG AATACTGGGG AGTGCGCAAA AATGGAGAGA TCTTCCCCAA GGATGTCCGC
TTCTACAAAG GGACGTACTT TGGAGAGGAG GTACTGATCA GCATCGCCAC TGACATCACT
GAACAGAGGC ATGCATCGGA TACCATCCGG CTCTCCCATA CCCTGCTCGA GGTCGCCAAC
CGGCCACTGG ACTGTCCGGT CCTCCTGCAG GAGTATCTCC AGGTGATCCA GGAGTATGCC
GGCTGCGATG TGGTGGGGAT CCATCTCTTC GATCAGGCAG GGATGACCCC GTATGAAATC
TGGAGCGGGA ACCCTGGAGC GGGAGACGCG TTCGGTAACC CATTGTCGAG GATCGTCGAC
GAGACGATCA GCACTGCGGT CATCGAGGGT GTCACCGATC CAGATCTACC CATCTTCACC
AGCAGCGGTT CGTTCTTCAT CAACGCCACC ACGACAGGAC CGACCATGCT CCAGAAGGAG
GCCGGCGACC CGACCTGGAA CCTCACCAAC CAGGCAGATT TTGAGTCCGT CGCCCTTGTC
CCCCTCTGGC AGAACAACCG GGTCATCGGT CTCATCTGCC TGGCCGATCG ACGGGAACAG
AGGGTTCCCC TTGCCCGGGT GGTGGTGATT GAAGAGGTCA CCCCCCAGAT GATCACCGCA
ATCCAGCGGG TCGCTGCAGA GGACCGGATA CGGAACTCGC TCGAAGAGAA GGAGGTGATG
ATGAAGGAGA TCCATCATCG GGTGAAGAAC AACCTGGCCG TGATCATCTC GCTGATCGAC
CTCCAGGCCG ACGATATCAC CGACGAACAG ACCCTTCAAC TGTTGCACGA CCTGCGGGGA
AGAGTGGCCA CGATGGCACT GGTCCATGAG TTTCTGTATG GATCCAGGGA TCTCTCGCAG
ATAAACTTCG GCCAGTATCT GCAGGACCTG GTCCCGAAAC TGATCCAGTC GCTGGGTGGT
TCCACCCCGG TGAAGGTGCT GTATGAGGTC GACCAGGCCC TCCTCCCCCT CGAGATCGCC
GTCCCCTGTG GACTCATTGT CAACGAACTG GTCACAAACT CCCTGAAATA TGCGTTTCCC
ATCGACAGGC CGATCCCCGC TGACACCGAT CAAGCCTGTA CCATCACAGT CTCCTTCATG
CAGACCCAGG ACGGGTTCAT CCTATCGGTC GGGGACAATG GGGCAGGACT GCCCGAACGG
TTCGACTGGA CGACCACAAA GACCCTGGGG TTCCAACTCG TCAGGGCTCT GGCCTGCCAC
CAGCTCCGCG GACGGGTGGA CCTTGAAGAG AGGGACGGAA CCAGGTTCAC GATACATATT
CCATGGACGT TGATCCAGAG TAGGGAATGA
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| Protein sequence | MFHVLYVDDE SDLLNLGKIF LEQSHQITID TATSAEDALT CGNLQTYDAV ISDYQMPGMN
GITFLKEVRS RYRDLPFILF TGRGREEVVI EAIDSGVDHY VQKGGDPRPQ FAELEHRVLQ
AIEARQGKVA LQESEERFRS LFTSIFNGFA HHQIICDAEG RPVDYRFIDV NPAFERLTGL
KRNEILGKTV LEVLPDIEPF WIERYGRTAL TGKSQSFEQF TAALNRYYEV TVYSPRPGEF
TTLFSDITSQ KQAEEILRER ETKFRTIVET SPDMIWEIDT RGIFTYLSPQ IGDILGYSTE
EMLGKPILFL IIPSFIPTVQ KILGSHLQSR EEINTFEVPA HHADGTPRSI EIRSAKIRDK
TGQVTGFRGI ARDVTERRRA EEELKESEAS YHGLFNTIRQ TIFILDQKGR FLDANDGAVS
MYGYPREAFL GRYPEFLSAP GMNDLKKIEE LIQKAFTGEP QQIEYWGVRK NGEIFPKDVR
FYKGTYFGEE VLISIATDIT EQRHASDTIR LSHTLLEVAN RPLDCPVLLQ EYLQVIQEYA
GCDVVGIHLF DQAGMTPYEI WSGNPGAGDA FGNPLSRIVD ETISTAVIEG VTDPDLPIFT
SSGSFFINAT TTGPTMLQKE AGDPTWNLTN QADFESVALV PLWQNNRVIG LICLADRREQ
RVPLARVVVI EEVTPQMITA IQRVAAEDRI RNSLEEKEVM MKEIHHRVKN NLAVIISLID
LQADDITDEQ TLQLLHDLRG RVATMALVHE FLYGSRDLSQ INFGQYLQDL VPKLIQSLGG
STPVKVLYEV DQALLPLEIA VPCGLIVNEL VTNSLKYAFP IDRPIPADTD QACTITVSFM
QTQDGFILSV GDNGAGLPER FDWTTTKTLG FQLVRALACH QLRGRVDLEE RDGTRFTIHI
PWTLIQSRE
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