| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0054 |
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| Symbol | |
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| ID | 7272223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 57747 |
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| End bp | 58625 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643568711 |
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| Product | putative signal transduction protein with CBS domains |
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| Protein accession | YP_002465171 |
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| Protein GI | 219850739 |
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| COG category | [K] Transcription |
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| COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTTT CGCTCATCCA GAAGGACATC CTGATCACCC TGATCACCCT CTATCACCAG
CACTCGCACC CGATCAAGGG TGAGGAGATC GCTGAGGTGA TCAAGCGGAA CCCGGGCACG
ATCAGAAATC AGATGCAGGC CTTGAAGGCA CTCGAACTGG TCGACGGGGT GCCAGGGCCC
AAAGGGGGGT ACAACCCGAC CGCCCGCGCC TACAAGGAAC TGAGCATATC GGTTGCAGAC
GGTGAGGCCA AGGTCCGGAT CACCCGGCGG GGAGAGGAAC TCCCTGGCGT CTCGGCGACC
GAGATCGACT TCACCACCCT CTGCCACCCG GATGTCTGCC ATGCGGTGGT GAAGGTGATC
GGATCGGTGA AGGGGTTTGA TATCGGCGAC CAGGTGGCCA TCGGCCCGAC GCCGGTGAAC
AAACTCTTTG TGCGGGGCGA GGTCTTTGGG AAGGATGAGG TCGACCAGGG GTTGATCATC
TCGATCTCAG AGATGATCTC ACTTCCAAAG CTGCCGATCC GCTGCTACAT GTCGACACCG
CTCCTGACGC TCGCCACCAG TGCGACGATC AGCGAAGCGA TCCATCTCTT CCATACCAGA
AACATCCACG GGGCTCCGGT GATGGACGAC GAGGCGATGA AAGGAATCGT TACGATCTCT
GACATCGTCC GGGCGATCGA CGAGGGATTG CCGGTCAGTG CACCCGTCTC GACGGTGATG
ACCCCCGACG TGATCGAAGC CGACGGCGGG GTTCGCCTCT TCGAGGTGGT GAAGCGGTTC
AAGGAGCGGG AGATCGGCCG TCTGATCGTC GTCGAGAACG GGAGTCCGGT CGGGATCCTG
ACCCAGTCAG ACGTGCTCCG CGTCTTCCCG ACAGACTGA
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| Protein sequence | MDLSLIQKDI LITLITLYHQ HSHPIKGEEI AEVIKRNPGT IRNQMQALKA LELVDGVPGP
KGGYNPTARA YKELSISVAD GEAKVRITRR GEELPGVSAT EIDFTTLCHP DVCHAVVKVI
GSVKGFDIGD QVAIGPTPVN KLFVRGEVFG KDEVDQGLII SISEMISLPK LPIRCYMSTP
LLTLATSATI SEAIHLFHTR NIHGAPVMDD EAMKGIVTIS DIVRAIDEGL PVSAPVSTVM
TPDVIEADGG VRLFEVVKRF KEREIGRLIV VENGSPVGIL TQSDVLRVFP TD
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