| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0044 |
|---|
| Symbol | |
|---|
| ID | 7272213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 41593 |
|---|
| End bp | 42543 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643568703 |
|---|
| Product | Ion transport 2 domain protein |
|---|
| Protein accession | YP_002465163 |
|---|
| Protein GI | 219850731 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAAA ATCCAGAACA CCCGACAGAG AAGATCACCA CGGGACCGTC CCGCTATGAC
CAGATAAAGG CCCGGGTCCG TACGATCCTC AATGCATCCC AGGACAGGGA TCGAACAACA
CTGCTCATCC AATCCTTCCT CGCTGTCGTC ATCCTTACCA ATACGATCGC CGTCGTTGTC
TCGACCATAC CGGATTTCCC CCTCCAGTTT CTGGTCTTAT CGGTCATCGT GGTCTGTCTC
TCCATTTTTT CTATCGAATA TATCCTGCGG CTCTGGTCAT GTACCCACAG CGGCACGGTC
AGGGGCAGGG CGATCGATCG CCTGCGTTAT GCAATTCAGA TCTCCATGAT CATCGATCTC
ATCTCGATCA TCCCCATCCT CTTCTTCTAT CTCTTCCCCC GGATCCCTGC CCTGCTTCAT
CTCTTCATGC TCCTCTCGAT CTTCAAACTG GTGCGCTACA GTCGGGACTC AGAATCACTC
AAACAGTTAC GCCGTGTCAT CTTCAAGAAG CGGGAGATCA TCTCAATTCT GGGAATTTTT
CTGATCTTTG AGATCCTCTT CTCCTCGACG ATCATGTACA TTATCGAAAA CGCAGCACAG
CCGGATACAT TTTCGAGCAT CCCTGCAGCC ATGTGGTGGG CGGTGATGAC GGTGACGACT
GTGGGATATG GAGATATTAT CCCCATCACT CCCCTGGGAA AGATCATCGC AGGTATGGTG
ACGATCGGGG GCGTCTTGCT CCTCGCCCTC CCCTCTGCGA TCCTTGCTTC TGGATTTATG
GAGGAGCGGC AGAGAGAACA GATGGTTCGG GATCATCCCG GGATCGAGGC TGGGATTTCG
CTGCTTGAAC GGGTGGGAAC CTTAAAAGAG CGGGGGCTCA TCACCGAAGA GGAATTTGAC
GAGTATAAGG TACTCGTTCT GCTCGGATTG CACGAAGAAG AGAAAACTTG A
|
|---|
| Protein sequence | MSENPEHPTE KITTGPSRYD QIKARVRTIL NASQDRDRTT LLIQSFLAVV ILTNTIAVVV
STIPDFPLQF LVLSVIVVCL SIFSIEYILR LWSCTHSGTV RGRAIDRLRY AIQISMIIDL
ISIIPILFFY LFPRIPALLH LFMLLSIFKL VRYSRDSESL KQLRRVIFKK REIISILGIF
LIFEILFSST IMYIIENAAQ PDTFSSIPAA MWWAVMTVTT VGYGDIIPIT PLGKIIAGMV
TIGGVLLLAL PSAILASGFM EERQREQMVR DHPGIEAGIS LLERVGTLKE RGLITEEEFD
EYKVLVLLGL HEEEKT
|
|---|
| |