| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0042 |
|---|
| Symbol | |
|---|
| ID | 7272211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 40832 |
|---|
| End bp | 41092 |
|---|
| Gene Length | 261 bp |
|---|
| Protein Length | 86 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643568701 |
|---|
| Product | PRC-barrel domain protein |
|---|
| Protein accession | YP_002465161 |
|---|
| Protein GI | 219850729 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1873] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAGTA CATTCTCACG GAGCCTCTCC CGAAAAAAAG TGATGAGCAA TGATGGTATG
GTGATAGGCA CCCTCAAGAA CGTGATGGTT GACCTGGACA GCGGGCAGGT GATCGATCTG
ATCGTGAAGC CTGACAGCAC CTTCGATGCG ACAGGATACC GGATCGACGG CGATCGTATG
ATGATCCCCT TCGAAGCGGT CAAGGATATC AAGGACTATA TCGTCGTGGA TCGGTTCCTC
TCCAAGTCAC CGTCTGCATA A
|
|---|
| Protein sequence | MVSTFSRSLS RKKVMSNDGM VIGTLKNVMV DLDSGQVIDL IVKPDSTFDA TGYRIDGDRM
MIPFEAVKDI KDYIVVDRFL SKSPSA
|
|---|
| |