| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0039 |
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| Symbol | |
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| ID | 7272208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 37653 |
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| End bp | 38933 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643568698 |
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| Product | nucleic acid binding OB-fold tRNA/helicase-type |
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| Protein accession | YP_002465158 |
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| Protein GI | 219850726 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1599] Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.858141 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTTC ACTATGCCCT GGTCGACGAT CTGATGACCG GGTCCGAATT CGAGGCGAAG
GTCGAGGCGC AGATCGCGGC CTGCGGCGAC CTGATCGACG AGCAGACCGC GGCGATGCTG
GTGGTCCGGG ACGCTGGCCG TCAGCATCAG AAGATCCGGG ACCTGGCCGG CCGGTCCAGC
CTGGTCCTCT TCTTTGCGAG GCTCCTCTCA GTCACCCCTC CGCGCGCGTT CACCCGGAAG
GACGGGAGCG AAGGGATGGT CTCGACGATG ACCGTTGGGG ACGAGTCGGG CAGGATCGAG
GTGACCCTCT GGGACGAGCG GGCAGAGGCC GCGGCAGAAC TCGAGGTTGG CGAGGTCTTT
GAGATCATCG CGAAACGATC TGAGCGGCGG GCCGGCGAGT TCACCCTGAT GGCCATGCAG
AAGGCGGCCT GCGAGATCCG GTGCCAGGCG CCGCAGCCTG TGCAGGAGGG GGAGGATGCC
CCTCCAGAAC TGGTCGTCAG GCTGCTGGCT TTGGAGGAGC TGCGGACCTT CTCGCGGCGG
GACGGGACGA CCGGGGAGAT GGTCGGGGCC CTGATCGGTA CCGAGGCCGG GACGGCCCGG
CTGGTCTGCT GGTACCCCCC GCTCCTCGAC GGGTTCACGG CCGGGGAGGT GATCCGGCTG
GTCGGGGCGA CCCGAAACCA CCGCTCTGAA CGGCCGGAGT ACATGATCAG CGAGACCGGG
GAGATCACGG CCACCGATCA GGAGGTGACG GTGCCCCTGA CCCCGCTCTC GGCGCTGGTC
CCGGACCAGA CCTTCTCGGT TGCCGGGACG GTCCACGCGA TCCAGCCGGC CCGGGAGTTC
GTGACCAGGA ACGGATCCCG TTCCTGGGTG CGGAACCTGA TCATCGGGGA TAAGGAGACG
GAGGTGCCGG TGGTGCTCTG GGGGGACCAT GCCCTGCAGG GGATCAGTGT CGGGGAGGCT
CTCTCTCTCT ACCACCTTTC GGCCCGGACC GGTCGTTCTG GTTCCCTGGA ACTGAGTGCC
GGCTGGGGGA GCGTGATCAT CACCCCGGCA CCCCCGCCCG AGGAGGTGAT CTTCTCCGGG
ACGGTGATCG TGACCAGGGC GGGTACCTTC CTGGATACCG ACGACGGCCG GTACCTGCTG
ACCGGCGGGG CGCCGCATGG CCGAACGGTG GAGGTGACCG GGGTGTTACA GGGTTACCGG
CTGACCCCGG CCAGCACCCG GCTGCTGGTT CCTGACTATG CTGCCGTGAA AGAGCGGATC
AGACATCTTA TCGACGGGTA A
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| Protein sequence | MQFHYALVDD LMTGSEFEAK VEAQIAACGD LIDEQTAAML VVRDAGRQHQ KIRDLAGRSS
LVLFFARLLS VTPPRAFTRK DGSEGMVSTM TVGDESGRIE VTLWDERAEA AAELEVGEVF
EIIAKRSERR AGEFTLMAMQ KAACEIRCQA PQPVQEGEDA PPELVVRLLA LEELRTFSRR
DGTTGEMVGA LIGTEAGTAR LVCWYPPLLD GFTAGEVIRL VGATRNHRSE RPEYMISETG
EITATDQEVT VPLTPLSALV PDQTFSVAGT VHAIQPAREF VTRNGSRSWV RNLIIGDKET
EVPVVLWGDH ALQGISVGEA LSLYHLSART GRSGSLELSA GWGSVIITPA PPPEEVIFSG
TVIVTRAGTF LDTDDGRYLL TGGAPHGRTV EVTGVLQGYR LTPASTRLLV PDYAAVKERI
RHLIDG
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