| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0038 |
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| Symbol | |
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| ID | 7270107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 36344 |
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| End bp | 37633 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643568697 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_002465157 |
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| Protein GI | 219850725 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTCC CCCCACACTT CTCGATCAGG GGCGGCGATC TCTTTATCGA GGGACAGAAC
TGCGTGGACC TGGCCGAGCA GTATGGCACC CCACTGTACG TGACCAGCGA GGACCGGATC
CGAACGCAGA TGCAGGGTTA TCGGGACGCC CTCTCCTCGT ATTATTCTGA CATATCGGTG
CTGTACGCGG CCAAGGCGAA CGGCAACCTG GCGGTCTTCC AGATCCTGGC CTCAGAAGGG
GCTGGCGCCG ATGTCTTCTC ATCAGGGGAG GTGGCGCTGG CCCTGAAGGC CGGTATGGAC
CCGCACAAGC TCCTCTTCAA TGGCAGTTCC AAGACCCTCA TGGACCTCGC CCTTGCGGTG
GAGCTTGGGA TCCGGGTCTC GGTGGACTCG CTCGACGAGC TCCACCAACT CGACGCCGTG
GCGGCTGAGG CCGGAAAGGT CGCCGAGATC GCGTTTCGGG TGAACCCGGC CCTCGAAGTG
CCGACGCATC CCAAGATCGC CACTGGCCTC GCCTCCAGCA AATTCGGGAT CCCGCATCAG
CAGATCCCGG CGGCCTATGC TGAGGCGCTC GCCTGCAGTA ACATAAAACC GGTTGGGATC
CACTGCCATA TCGGCTCGCA GATCCTGGAC GTCACCCCCT TTGCGAAGGC GGCCGAGGTG
ATGGTCAGGA TCGCCAGGGA GATCACCGAC CTCGGGATCA AGCTCGAGTT TCTGGACCTG
GGCGGCGGCC TCGGGATCCC GTATAACCAC ACCTCCGAGA CGGCGCCGTC GCCGGCAGAG
TACGCAGCAG CCGTAATGCC GGTATTTCTG GCCGGGATAA AAGAGTGCAA CATCCACCCA
GAACTCTGGG TGGAGCCGGG GCGGTCCCTG GTCGCCGACT CGACGGTGCT GTTGGCCACG
GTCAACTCGG TGAAGAAGGC CCACAAGACG TTCGTGAACG TGGACGCCGG GTTCAATCTG
CTGATTCGGC CGGTGATGTA CGACTCCTAC CATGAGATCG TCGTGGCCAA CCGGGCCGAC
CAGCCGATAG CCGGGACGTA CACGGTCGCC GGGCCGATCT GTGAGACCGG TGACCTGCTG
GCGGTTGACC GGGCGCTGCC GGGCGTCCAG GAGGGCGACC TCGTCGCCGT GCTGGACACC
GGGGCCTACG GGTTCTCGAT GTCCTCGCAG TACAACAGCC GGCCCCGGTG TGCCGAGGTG
CTGATCCGGG GTGGGGATGC CGCCCTGATG CGCAGGGCAG AGACGGTCGA CGACCTGCTG
GCCTCGATGG TCACCCCTCC CTGGCTCTAA
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| Protein sequence | MILPPHFSIR GGDLFIEGQN CVDLAEQYGT PLYVTSEDRI RTQMQGYRDA LSSYYSDISV
LYAAKANGNL AVFQILASEG AGADVFSSGE VALALKAGMD PHKLLFNGSS KTLMDLALAV
ELGIRVSVDS LDELHQLDAV AAEAGKVAEI AFRVNPALEV PTHPKIATGL ASSKFGIPHQ
QIPAAYAEAL ACSNIKPVGI HCHIGSQILD VTPFAKAAEV MVRIAREITD LGIKLEFLDL
GGGLGIPYNH TSETAPSPAE YAAAVMPVFL AGIKECNIHP ELWVEPGRSL VADSTVLLAT
VNSVKKAHKT FVNVDAGFNL LIRPVMYDSY HEIVVANRAD QPIAGTYTVA GPICETGDLL
AVDRALPGVQ EGDLVAVLDT GAYGFSMSSQ YNSRPRCAEV LIRGGDAALM RRAETVDDLL
ASMVTPPWL
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