| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0037 |
|---|
| Symbol | |
|---|
| ID | 7270149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 35199 |
|---|
| End bp | 36347 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643568696 |
|---|
| Product | aminotransferase class I and II |
|---|
| Protein accession | YP_002465156 |
|---|
| Protein GI | 219850724 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | [TIGR03540] LL-diaminopimelate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATGCAC AGCGCATGGG TTCTCTCCCA CCCTATCTCT TCGCCCGTAT CGATGCGATG
AAGGCAGAGA AGATTGAGCA GGGCGTCGAT ATCATCGACC TCGGTGTCGG TGACCCGGAC
CTGCCGACTC CGCCCCACAT CGTTGAGGCC CTCTGCACGG CCGCACGGGA CCCGAAGAAC
CACCACTACC CCTCGTACGC CGGGCTGCCG GCGTTCCGCT CGGCGGTCGC CGACTGGTTC
CAGCACCGGT TCCATGTCAC CCTCGACCCG AAAGATCAGA TCCTCTCGTT GATGGGCTCG
AAGGATGGGA TCGCCCACAT TCCCGAGGCC TTCATCAACC CCGGCGACGT GGTGCTGGCT
CCTAGCCCAG GGTACCCGGT CTATCGGACC TCGACCCTCT TCGCCGAGGG GACGATCCAT
GAGATGCCGC TCACTGCTGA AGCAGGGTTT CTGCCGGTCC TCGATGACAT CCCAAAGGAG
GTCGTTGCGA AGGCGAAACT CCTCTTCCTG AACTACCCGA ACAACCCGAC CTCGGCGGTC
GCCCCGATGA AGTTCTATGA CGAGGTCGTC GCCTTCGCCC GCGAGCACAA CATCGTCGTC
GTCTCCGATA ACGCCTATTC TGAGATCTCG TACGACGGCT ACAAGTCCCC CTCGTTCCTC
AAGGCCGACG GGGCGATGGA GGTCGGTGTC GAGATGCACT CCCTCTCCAA GACCTACAAC
ATGACCGGCT GGCGGCTCGG GATGGCCGTC GGCAACGCCG AGATCCTGGC CGGCCTCGGC
CGGGTGAAGA CCAATGTAGA CTCCGGGGTC TTCGATGCGG TGCAGCATGC CGGTATCGCG
GCCCTCTCCG GCTCGCAGGA ATGTATCGGC GAGGCCTGTG CAGTCTATAA GGAACGGCGC
GACGTACTCG TCAATGGACT CCGATCCCTT GGTTACCAGG TGACCGCTCC GAAGGCGACC
TTCTATGTCT GGATGCCGGT CGACGACTGC ATGGCTTTTG CGGCCCGACT GCTGAACGAG
GCAGGGATCG TGGCGACGCC CGGGCTCGGG TTTGGTTCGT CGGGTGAAGG CTACGTCAGA
TTCGCCCTTA CCCGACCGGT GGAGCGGATC CAGGAAGCCC TCGACCGGAT CGCGGGGATG
AGCCGATGA
|
|---|
| Protein sequence | MYAQRMGSLP PYLFARIDAM KAEKIEQGVD IIDLGVGDPD LPTPPHIVEA LCTAARDPKN
HHYPSYAGLP AFRSAVADWF QHRFHVTLDP KDQILSLMGS KDGIAHIPEA FINPGDVVLA
PSPGYPVYRT STLFAEGTIH EMPLTAEAGF LPVLDDIPKE VVAKAKLLFL NYPNNPTSAV
APMKFYDEVV AFAREHNIVV VSDNAYSEIS YDGYKSPSFL KADGAMEVGV EMHSLSKTYN
MTGWRLGMAV GNAEILAGLG RVKTNVDSGV FDAVQHAGIA ALSGSQECIG EACAVYKERR
DVLVNGLRSL GYQVTAPKAT FYVWMPVDDC MAFAARLLNE AGIVATPGLG FGSSGEGYVR
FALTRPVERI QEALDRIAGM SR
|
|---|
| |