| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0013 |
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| Symbol | |
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| ID | 7270125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 11654 |
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| End bp | 13051 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643568672 |
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| Product | tRNA CCA-pyrophosphorylase |
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| Protein accession | YP_002465132 |
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| Protein GI | 219850700 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1746] tRNA nucleotidyltransferase (CCA-adding enzyme) |
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| TIGRFAM ID | [TIGR03671] CCA-adding enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.099852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGAGG AGGAGATCCA GCCAGTGCTC GCCCGGGTCA TCGAACGGAT CCGGCCTGAG
GCCGAAGAGG TGGCGGCGAT CTGGCAGGTC GCAGACAGGC TTATCGCTGC AGTCATAGCA
TCCGGTGCTG CAGAACCGAT GGTGGTCGGT TCGGTGGCTA GGTCCACCTT TGTTCGAGGC
GACCGGGATC TGGACCTCTT CATGCTCTTC CCTCCCGATC TCCCGCGGGA AGCGCTCGAG
GGGCAGGGGC TTGGTCTAGC CCGCTCGCTG GCTGATCAGT TCGGGGGAAA TTACCAGGAG
AAGTACGCCG AGCACCCGTA CATCAACACC ACCATCGATG GAATCGATGT CGACCTGGTC
CCCTGTTATA AGGTCACCTC TGCGACGGCC ATTCAGTCGG CGGTGGACCG GACACCGTTC
CACACTCGGT ATGTGATCGC ACGGATCGGA AATTTGGCCG ACGATGTGCT CCTGCTCAAA
CAGTTCGCCA AGGCCTGTGG TGTCTATGGT TCAGACCAGA TGACCGAGGG GTTCGCCGGC
TACCTCTGCG AACTACTGGT CCTCCACTAT GGCGGGTTCC TGCAGGTAAT GGCCGCGGCT
GCTGGGTGGC GGTCTAGGAC CGTCATCGAT CTGGAGCAGC ATGCGACCAA GACCTTTGAT
GAGCCGCTCG TCGTCGTCGA CCCGGTCGAC CCGAATCGGA ACGTCTCCGC CTCGGTCTCC
CTCTCCAGAA TGTTTGAGTT CGTGGAGATG GCCCGCGGGT TCCTTGAGCA CCCTGGAGAA
GAGTTCTTTG TAATTCCAGA TCCAGAACAG ATCAGCAGAG AAGATCTCTC TGCAGCGCTT
GAGGTTAGGG GGACCTGCCT CTGTGCCGTG ACCTTTGCGA CTCCCCCGTT CATCGAGGAT
GTGGTGGTCC CGCAGCTCCG TCGCTCCCTT GATGGTACCT GTCACCTGCT CGAACGGTCA
GGATTCATGG TCAACCGGGC GGACGCCTGC ATGGGGGAGG AGCAATGTCT CCTCCTCTTT
GAACTGCTGG CCCCGTCGGT GGCCCGTGTC AGGCGGCATA TCGGCCCGCC ACTCTCGAGC
CGGGATAATG CAGAGAAGTT CCAGAAGAAG TACAGCGATC CTTCCCTATC CATCACCGGG
CCGTACATCG AGGACGGGCG GTATGTGGTC GAGGTGCTTC GCCAGTTCAC CACCCCGGAG
ACGCTGCTTG GTTCGGAGCT GCTTCTTACG GTCTCGCATG GAAAGCATGT CCGTCGATCG
CTGAAGAAGG GATGGCAGGT CAGGCTGGGG GATGACTGCT GGTCAGAGGA GTTTGGATGT
TTCTTCAACG CATTTATGAA TGCCTCGTCC CCGCTGGTCC GTCTTCTCAA GAGAGGGGCC
GACGGGGGCC AGGACTGA
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| Protein sequence | MNEEEIQPVL ARVIERIRPE AEEVAAIWQV ADRLIAAVIA SGAAEPMVVG SVARSTFVRG
DRDLDLFMLF PPDLPREALE GQGLGLARSL ADQFGGNYQE KYAEHPYINT TIDGIDVDLV
PCYKVTSATA IQSAVDRTPF HTRYVIARIG NLADDVLLLK QFAKACGVYG SDQMTEGFAG
YLCELLVLHY GGFLQVMAAA AGWRSRTVID LEQHATKTFD EPLVVVDPVD PNRNVSASVS
LSRMFEFVEM ARGFLEHPGE EFFVIPDPEQ ISREDLSAAL EVRGTCLCAV TFATPPFIED
VVVPQLRRSL DGTCHLLERS GFMVNRADAC MGEEQCLLLF ELLAPSVARV RRHIGPPLSS
RDNAEKFQKK YSDPSLSITG PYIEDGRYVV EVLRQFTTPE TLLGSELLLT VSHGKHVRRS
LKKGWQVRLG DDCWSEEFGC FFNAFMNASS PLVRLLKRGA DGGQD
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