Gene Cagg_3706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3706 
Symbol 
ID7268242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4504225 
End bp4505202 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content60% 
IMG OID643568513 
Productglycosyl transferase family 2 
Protein accessionYP_002464978 
Protein GI219850545 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000558134 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000472149 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAACATA CCTTGTCGCC GATTGGCGTT GTCGTCGTTT CGTACAATAC GGCCCCCTTG 
TTGCGGCGTT GTCTGGCGTC GTTGCAGGCA TGCACGTTGC CACTGCGGAT TGTTGTGGTG
GATAACGGCT CGCAAGATGA GAGCGTCGCG CTGGTGCGGC GTGAATTCCC GACGGTGACG
GTGCGAGAAC GGCCGGATAA TCCCGGCTAT GCGGCTGCGT GTAACGAGGG TATCAGCCTA
CTCGTAGATA CCTGTGGGGC GATTTTGGTG CTGAACCCCG ACACCGAGCT ATTACCGGGA
GCAATTGAAG CGATGGCCGA TTTCCTTGCG GCGCATCCGC GCGTTGGGTT GGTGGGGCCG
CGCTTGCTCA ACCCCGATCA CACACTTCAA CGAGCTGCCT TCCGTTTTCC CGATCTGATC
ACGACGGCCC TCGATCTCTT CCCGCCCGGC GAAGTCTTGC CCGGTCGCCT CTACGACTCG
TGGTGGCACG GACGTTACCC GGCTGAACTT GGTGATGCTC CCTTTCCGAT TGACTACCCC
CTTGGCGCCT GTATGATGGT ACGCAGCGCT ACCATTGGCG AAGTGGGGCT TATGGACGAA
GACTATTTTA TGTACTGTGA AGAGATCGAC TGGTGCCGAC GGATCAAGCA GGCCGGATGG
GCAATCTGGC AGGTTCCGGC GGCACACGTT ATTCACGTCG GTAGTGCAGC TACCGGCCAA
TTCCGGTGGA AAATGTACGT CGCCTTGTGG CGGGCACGGG CGCGGTACAC GGCCAAGTTC
GGGGGCCGAG GTCTACGCTA CGCACATACC GCCCTCGTCA CTCTCGGTAT GCTCCGCCTG
ATCGGCAAGG CGTGGCGTGA TTACTTCAGT GGACGGATCG ACCGGGACTC CCTACGCGGG
CAACTCCTCG CCTACGGATT AATTTTGCGC ACAACCGGCA ATTTGGCTGC TCAACCGGTT
GCGAAGGCGA CAGGCTGA
 
Protein sequence
MEHTLSPIGV VVVSYNTAPL LRRCLASLQA CTLPLRIVVV DNGSQDESVA LVRREFPTVT 
VRERPDNPGY AAACNEGISL LVDTCGAILV LNPDTELLPG AIEAMADFLA AHPRVGLVGP
RLLNPDHTLQ RAAFRFPDLI TTALDLFPPG EVLPGRLYDS WWHGRYPAEL GDAPFPIDYP
LGACMMVRSA TIGEVGLMDE DYFMYCEEID WCRRIKQAGW AIWQVPAAHV IHVGSAATGQ
FRWKMYVALW RARARYTAKF GGRGLRYAHT ALVTLGMLRL IGKAWRDYFS GRIDRDSLRG
QLLAYGLILR TTGNLAAQPV AKATG