Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3685 |
Symbol | |
ID | 7268220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 4478531 |
End bp | 4480441 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643568491 |
Product | DNA gyrase, B subunit |
Protein accession | YP_002464957 |
Protein GI | 219850524 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.50658 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGAACG AAACTCCGAC AACCTACGAC GAAAGTCAGA TTCAAGTGCT GGAAGGCATG GAAGCCGTCC GCAAGCGCCC CGGTATGTAT ATCGGTCCTA CCGATATCAA CGGCCTCCAC ACGATGGTGC GCGAGGTGGT TGATAACTCG GTCGATGAGG TGATGGCCGG ACGGGCGACG AGTGTCAGTG TGACTATTCA CCGCGACGGT TCGGTGACGG TGAGTGATGA TGGTTCCGGG ATTCCGGTTG GTATCCATCC GAAAGAGGGT ATCAGCACCC TCACACTGGT CATGACGCGC TTGCACGCCG GCGGTAAATT CGGTAGCGGC GGCTACAAGG TCTCTTCCGG CCTGCATGGC GTTGGTGTTT CGGCAGTCAA TGCGCTTTCG TCGTATATGC GGGTCGATGT GTATCGTAAT GGTCGTCATT ACTACCAGGA GTATCGGGCC GGTGTGCCGG TGACGGATGT GATCGATCTG GAACCAACCG ATCGTCACGG TACGACGACG CGCTTTTTAC CCGATACCTC GATTATTCAG ACGCTCGACT ACAATTTCGA TACGCTCGCC CAACGTTTCC GCGAGATGAG CTATCTCAAC AAGGGGTTGC GGTTTAAGTT TGTTGATGAG CGTACCAATC GCGAACTGAA CTTTTACTTC GAGGGCGGGA TTGTGTCGTA TGTCCGCCAT CTCAATAAAG ATAAGGTTGT ACTCCATCGC CAGCCCTTCT ATGTCGAGCG GGTGGTTGAT GAGGTGATGG TGGAAGTGGC GTTACAGTAT ACCGATACGT TTGACACGGA TAATGTTTAT ACTTTTGCAA ATAATATCAA TAACTCTGAC GGTGGTTCGC ATTTGTCAGG GTTTCGCACG GCACTAACCC GCGTGATCAA TAGTTATGCG CGCGCCAAAG GGCTGTTGAA GGAGAATGAG AGTAATCTTA CCGGCGATGA CGTGCGTGAG GGGTTGACGG CGGTGATCAG TGTGAAGCTG AAAGACCCGC AGTTTTCCTC ACAGACCAAA GAGAAGTTGG TTAGCCCGGA AGCAGCCAGT GCAGTGGCGA CGGTGTTTGG CGATGCGTTT AGTGCCTGGC TCGATGAGAA CCCGGCTGAT GCGCGGCGGA TTATCGAGAA GGCGATCACG GCGGCGCGCA CTCGCCTTGC TGTGCAGAAA GTACGTGAGA CGGCGCGCAA GAGCGCGATG GAAGGCTTTT CACTGCCCGG CAAGTTGGCC GATTGTTCAG ACCCCAACCC GGCTCGTTGC GAGCTGTATA TTGTCGAGGG TGATAGCGCC GGTGGGACGG CTAAGCAGGG CCGTGACCGC CGTTTTCAGG CCATTCTGCC GCTGCGCGGT AAGATTCTAA ATGTCGAGAA GAGCCGGCTT GACCGTATGC TGTCAAACGC CGAAGTGCGT GCTCTGATTA CCGCTATCGG TACGTCCATC GGTGACCAGT TTGATCTGAG TAAGCTGCGC TATCACCGTA TCTTTCTCAT GACCGACGCT GATGTTGATG GGAGCCATAT TCGTACCCTG TTACTTACCT TTTTCTTCCG CCACATGCGG CCTCTGATTA CCAACGGCCA TCTCTTTATT GCGCAACCCC CGCTCTATCG GATTAAACAC GGACGTGAGC AGGTCTACAC CTATTCCGAT GCCGAGCGTG ATGCGTATCT CAGCAAACTG CCACCCGGAA CCAAGGTTGA GATTCAGCGC TACAAAGGGT TGGGTGAAAT GAATGCCGAA CAACTGTGGG AGACAACCAT GAACCCACAG AACCGGGTGA TCTTGCAGGT GACGCTGGAA GATGCCGCGC GCGCTGATGA GACGTTCACG ATGTTGATGG GTGATCTGGT GCCGCCACGC CGCCGGTTTA TCCAGACCCA CGCGAATGAG GTGGTGGAGT TGGATATTTA A
|
Protein sequence | MTNETPTTYD ESQIQVLEGM EAVRKRPGMY IGPTDINGLH TMVREVVDNS VDEVMAGRAT SVSVTIHRDG SVTVSDDGSG IPVGIHPKEG ISTLTLVMTR LHAGGKFGSG GYKVSSGLHG VGVSAVNALS SYMRVDVYRN GRHYYQEYRA GVPVTDVIDL EPTDRHGTTT RFLPDTSIIQ TLDYNFDTLA QRFREMSYLN KGLRFKFVDE RTNRELNFYF EGGIVSYVRH LNKDKVVLHR QPFYVERVVD EVMVEVALQY TDTFDTDNVY TFANNINNSD GGSHLSGFRT ALTRVINSYA RAKGLLKENE SNLTGDDVRE GLTAVISVKL KDPQFSSQTK EKLVSPEAAS AVATVFGDAF SAWLDENPAD ARRIIEKAIT AARTRLAVQK VRETARKSAM EGFSLPGKLA DCSDPNPARC ELYIVEGDSA GGTAKQGRDR RFQAILPLRG KILNVEKSRL DRMLSNAEVR ALITAIGTSI GDQFDLSKLR YHRIFLMTDA DVDGSHIRTL LLTFFFRHMR PLITNGHLFI AQPPLYRIKH GREQVYTYSD AERDAYLSKL PPGTKVEIQR YKGLGEMNAE QLWETTMNPQ NRVILQVTLE DAARADETFT MLMGDLVPPR RRFIQTHANE VVELDI
|
| |