Gene Cagg_3566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3566 
Symbol 
ID7269709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4330859 
End bp4331725 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content56% 
IMG OID643568373 
Productprotein of unknown function DUF161 
Protein accessionYP_002464840 
Protein GI219850407 
COG category[S] Function unknown 
COG ID[COG1284] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.332576 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.685125 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACAC AGTCGCGCTG GCAACGATTT GCTCGGACCA TCTACGACTA TGTGTTGCTG 
ACCGTTGGTG CGTTGCTGAG TGCAACTGCT GTGCGCTTCT TTTTGGTACC GAATCAGGTT
GTCACCGGTG GTATCACCGG GATAGCGCAA TTGCTCAATA CCTTTCTCGG CACACCGGTC
GGTGCTGTGG TGTTACTCCT CAACGTACCC CTCTTGATCG CGGGCTGGCG GTATCTCGGA
GGGGCTGTGT TCGGTATCCG TACCTTGTAT ACCGTTGTCG TGATGTCGTT GGCGATTGAT
GGTCTGGTGC CTTTTGCTCG CCCTATCACC AACGATCCAC TCCTGTACAG CCTCTACGGA
GGGCTGATCG ATGGTCTAGG GATTGGGTTG GTGTTGCGCG CACGTGGTAC GACCGGTGGT
AGTGATATTT TGGCTCGTCT CATCGAGCGC CGGTTCGGGA TTCAGCCGGG CCGTAGCTTG
CTCAGTTTCG ACGCACTGGT CTTTACCGCG GCCCTCTTTA GCTACGGGCC GGAGAAGATC
CTCTATGCAT TGTTGGTAGC GTTTACTGCC AGTCGTGCTA TCGATACCGT ACTCGCCGCC
GGAAAAGGCG CACGCCAGGC ATTGATCATC ACCGCCAATC CTGACCCGAT CCGGCAGGCG
GTACTCCATC GCCTCGGTCG AGGGATTACC GAGCTTGAAG GGATCGGTGG TTACTCCGGT
GCGAAGCGTG CTGTCCTTCT GTGTGTTGTG GCCCGCACTG AAATCGGTTT TCTCAAGAAT
GTTGTGACCA CCGTCGATCC TGCGGCGTTT GTCATTATCG GCGATGTTGA CGAAGTCATC
GGTGAAGGAT TCCAACGACC GACGTAG
 
Protein sequence
MQTQSRWQRF ARTIYDYVLL TVGALLSATA VRFFLVPNQV VTGGITGIAQ LLNTFLGTPV 
GAVVLLLNVP LLIAGWRYLG GAVFGIRTLY TVVVMSLAID GLVPFARPIT NDPLLYSLYG
GLIDGLGIGL VLRARGTTGG SDILARLIER RFGIQPGRSL LSFDALVFTA ALFSYGPEKI
LYALLVAFTA SRAIDTVLAA GKGARQALII TANPDPIRQA VLHRLGRGIT ELEGIGGYSG
AKRAVLLCVV ARTEIGFLKN VVTTVDPAAF VIIGDVDEVI GEGFQRPT