Gene Cagg_3527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3527 
Symbol 
ID7266455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4292641 
End bp4293468 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content55% 
IMG OID643568335 
Productprotein of unknown function DUF114 
Protein accessionYP_002464802 
Protein GI219850369 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0616] Periplasmic serine proteases (ClpP class) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTCT TCGCGCTGTT GTGGCTCTTT TTCATCATCT CGTCGTTGCA GCCGGTGATT 
AAGCAGCATA TGCTCGATGC CGCGCGCCAG CGACTACTCG AACAGTTGGA ACGCAAGCGT
AAAAGTCGGG TAATTGTGCT CATCCACCGC CAAGAGACGA TGAGTCTTCT CGGTTTTCCG
TTAGTGCGGT ATATCAACAT TGAAGACTCT GAAGCGGTGT TGCGCGCCAT TAAGATGACC
GATCGCGATA TTCCGATTGA CCTGATCCTA CACACTCCCG GTGGCTTGGT GCTGGCTTCG
GAACAGATTG CTCGCGCCCT CCGGCGCCAT CCAGCTAAGG TGACGGTGTT TGTTCCCCAT
TATGCGATGT CGGGCGGTAC GCTGATTGCG CTCGCCGCCG ATGAGATTGT GATGGACGAG
AATGCCGTGC TAGGGCCGGT CGATCCGCAG TTGGGTCAGC ATCCGGCGGC CTCGATTTTG
CGCGTGCTTG AGCGGAAGCC GATCAGCGAA ATTGATGATG AGACACTGAT GATGGCCGAT
ATTGCCGAAA AGGCAATCCG ACAGGTCAAG CATACGGTTT GTGAGTTGCT CAGTGATAAA
ATGTCGGTGG AAAAGGCGGA AGAGGTCGCG CATACACTCG CCAGTGGTGT TTGGACTCAC
GACTACCCGA TTACGGTACG CGAAGCTCGT GAATTGGGTT TGCCGATTAG TACCGATATG
CCCGAAGAGA TTTATCAGAT GATGGCGCTG TACCCGCAAA CTGCCCAGCG TCGTCCCTCG
GTTGAGTACA TCCCCGCACC GCGTTCGCGC CAGTACGATG TGTCGTAG
 
Protein sequence
MDFFALLWLF FIISSLQPVI KQHMLDAARQ RLLEQLERKR KSRVIVLIHR QETMSLLGFP 
LVRYINIEDS EAVLRAIKMT DRDIPIDLIL HTPGGLVLAS EQIARALRRH PAKVTVFVPH
YAMSGGTLIA LAADEIVMDE NAVLGPVDPQ LGQHPAASIL RVLERKPISE IDDETLMMAD
IAEKAIRQVK HTVCELLSDK MSVEKAEEVA HTLASGVWTH DYPITVREAR ELGLPISTDM
PEEIYQMMAL YPQTAQRRPS VEYIPAPRSR QYDVS