Gene Cagg_3402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3402 
Symbol 
ID7267142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4132442 
End bp4133119 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content58% 
IMG OID643568211 
Productclass II aldolase/adducin family protein 
Protein accessionYP_002464682 
Protein GI219850249 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID[TIGR00760] L-ribulose-5-phosphate 4-epimerase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.852747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CTTCACTCAC CGAGATTGAA AGGGCGCTAC GCGCCGAAAT GGTATTGTGC 
GGTCGCCTGC TCTATGAGCG GGGGTTGATC GTAGCCGGTG ATGGTAATCT CTCGGCCCGG
CTTCCCGATG GCACGATTTT GATGACGCCG GCCGGTTTGG CCAAAGGGAT GCTGACCACT
GATGATCTGG TCGTCGTCGA TCGCGACGGC CGGTTAATTC GGGGCGAAAC CAATCGCCAG
CCGTCCTCGG AACGCTATTT GCATCTCTTT GTCTACCAAC ATCGGCCCGA TATTATGGCT
TGTGTTCATG CTCACCCACC TACGGCGGTT GGGGCTACTC TTGCCGGCGT TAGTTTAGCT
GAGCCGTTGC TGCCTGAAGC GCAGATCGCA CTCGGTCCGA TACCAACTGC ACCCTATGCT
CTCACCGGTA CCATCGAGAT GGGAGCGGCA ATTGCCCCAT TTGTCGCCGA TCACGAGGCT
ATTCTATTAG CATATCATGG TGCATTAACT TACGGTGCAA CGCTGATGCA GGCCTTCCAC
CGAATGGAAC AAGTTGAACA CTGTGCGCGT ATCCTGCTAG CGGCCCATCT GTTTGGTGGC
GCGCGGCCCT TACCGCCCGA GCGTCTCGCC GAATTGGCCG AAGTACGGCA GGCATTTCGG
GCGTCCGGGC GTGTGTGA
 
Protein sequence
MTTTSLTEIE RALRAEMVLC GRLLYERGLI VAGDGNLSAR LPDGTILMTP AGLAKGMLTT 
DDLVVVDRDG RLIRGETNRQ PSSERYLHLF VYQHRPDIMA CVHAHPPTAV GATLAGVSLA
EPLLPEAQIA LGPIPTAPYA LTGTIEMGAA IAPFVADHEA ILLAYHGALT YGATLMQAFH
RMEQVEHCAR ILLAAHLFGG ARPLPPERLA ELAEVRQAFR ASGRV