Gene Cagg_3361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3361 
SymbolpyrB 
ID7267101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4074529 
End bp4075455 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content57% 
IMG OID643568170 
Productaspartate carbamoyltransferase catalytic subunit 
Protein accessionYP_002464641 
Protein GI219850208 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0540] Aspartate carbamoyltransferase, catalytic chain 
TIGRFAM ID[TIGR00670] aspartate carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.528301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000131858 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGAAC GACGCCGCCA CGCCATCGAT CTCGACGACT TTACTGCCAC CGAGATCGAG 
GAGATTTTAG AGACTGCCGA AAGCATGCGT GAGGTACTTA GCCGCGAGAT CAAGCAGGTA
CCGGCCTTAC GTGGCAAGAC GGTGGTCAAT ATGTTCTTTG AAGAGAGCAC GCGCACCCGG
ATCTCGTTTG AGCTGGCAGC GCGTGCGTTG TCTGCCAACG TCGTTGCCTT TACGGCACGT
GGCAGTAGCG TAGAAAAGGG TGAGTCACTG GTTGATACGG TGCGTACCCT ACAAGCATTA
GGAGCCGACA TCATTGTGAT GCGGCATAGC CGGTCAGGGG CGCCGTATCT AGTGGCACGT
CATTTTCGTG GTGCGTTGAT CAATGCGGGT GATGGTCGCC ATGCCCATCC TACCCAAGCC
CTACTCGACC TCTATACGAT GCGCAGCCAT CATGGTCAAA TTCGCGATCT GAATGTGGTG
ATCGTGGGTG ATATTCTGCA CAGTCGGGTC GTGCGTTCAA ACCTGTGGGG GCTTACCCGG
CTTGGTGCGC GCGTAACCCT CTGTGGGCCA CCGACGCTGA TCGGGCCGTC GGCATTTTGG
ACGGCCACAT GGCCGACGGT GCGCATTGCC TACGACCTCG ATCCGCTCCT GGCCGAGGCC
GATGTGGTAA TGGCGCTCCG GTTGCAGAAA GAGCGTATGC AACACGGCTT GTTGCCGGCG
TTACGCGAAT ATACCCGTAT ATACGGTCTC ACACCCGAAC GCCTTGCGCG CCTACCAGCC
CACGCAATTG TGATGCATCC TGGGCCGATG AACGAAGGGA TCGAAATCTT TCCTGAAGTC
GCTACGTCGG CAACGGCAGT CATTGAGGAA CAGGTAACCA ACGGTGTCGC CGTGCGAATG
GCGTTACTGT ACCGAATGGC CGGTTGA
 
Protein sequence
MTERRRHAID LDDFTATEIE EILETAESMR EVLSREIKQV PALRGKTVVN MFFEESTRTR 
ISFELAARAL SANVVAFTAR GSSVEKGESL VDTVRTLQAL GADIIVMRHS RSGAPYLVAR
HFRGALINAG DGRHAHPTQA LLDLYTMRSH HGQIRDLNVV IVGDILHSRV VRSNLWGLTR
LGARVTLCGP PTLIGPSAFW TATWPTVRIA YDLDPLLAEA DVVMALRLQK ERMQHGLLPA
LREYTRIYGL TPERLARLPA HAIVMHPGPM NEGIEIFPEV ATSATAVIEE QVTNGVAVRM
ALLYRMAG