| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3347 |
|---|
| Symbol | |
|---|
| ID | 7267087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 4059682 |
|---|
| End bp | 4060722 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643568156 |
|---|
| Product | tagatose 1,6-diphosphate aldolase |
|---|
| Protein accession | YP_002464627 |
|---|
| Protein GI | 219850194 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3684] Tagatose-1,6-bisphosphate aldolase |
|---|
| TIGRFAM ID | [TIGR01232] tagatose 1,6-diphosphate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000326066 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACAG TAAAAATGAC GCGCGGTAAA TTCGAGGGGA TCAAAGCCTG TGCTGATAAC
AACGGCATTA TTGCTGCCGC AGCGATGGAT CAGCGCGGTT CGCTAAAAAA GGCGATTGCT
AAAGCTCGTG GCGCCGATGC GTCAAATGAG GATTTAACCG TGTTCAAGAC GGCCGTTACT
CGTATTCTGA CCCGTTATGC GAGTGCGATT CTGATGGACC CAGAGTACGG TTTGCCGGCA
ATCGCCCAAC GTGCTCCGGG TACCGGTGTC TTGCTGGCTT ATGAGAAGAC CGGCTACGAC
GCCTCGGTGC GTGGTCGTTT ACCCGACCTG CTCGATGTGT GGAGTGTGCG TCGCTTGAAA
GAAGCTGGCG CTAACGCGAT CAAGATTCTG CTTTACTACA ATCCCTTCGA TGATCCGGCT
ATCAACGAGA TTAAACACGC CTTTATCGAG CGGGTAGGCG CCGAGTGTGC TGCGAACGAT
ATTCCCTTCT TCCTTGAGCC GATCGCCTAC GATGATACGG TTGGCGATGA GAAGAGCTTT
GAGTTTGCGC TGGTGAAGCC CAAGTATGTC ACCGCCTATA TGGCCGAGTT CTCGAAGCCG
CAGTACGGCG TCGATGTGCT TAAGGTCGAA GTGCCGGTGA ATGTGAAGTT TGTCGAGGGG
ATGCGCGTAT TTAGCGGCCA GAAGGCCTAT AGCCGTGAAG AGGCGAAAGA GTATTTCCGG
CAGGCTGCTG ATGCTGCCCG CAAGCCGTTC ATCTACCTGA GCGCCGGTGT ATCCGACGAA
GTTTTCCGTG AGACACTCGA ACTTGCCGCC GAAGCCGGTA CACCCTTCGC CGGTGTGTTG
TGTGGTCGGG CAACGTGGCA AGATGGTATT CCGGTCTATG CCCAGCAGGG TCTGGCTGCC
CTTGAGGCAT GGCTTGAGGA TCGCGGCGTT GCAAATATTA CTGCACTTAA CGAGACTCTG
GCGAAAGGCG CCAAGCCGTG GTGGACGATC TACGGTGGGC TTGAGAATAT CGAGGTAGTA
GATCTGCCGG TTGTAAATTG A
|
|---|
| Protein sequence | MATVKMTRGK FEGIKACADN NGIIAAAAMD QRGSLKKAIA KARGADASNE DLTVFKTAVT
RILTRYASAI LMDPEYGLPA IAQRAPGTGV LLAYEKTGYD ASVRGRLPDL LDVWSVRRLK
EAGANAIKIL LYYNPFDDPA INEIKHAFIE RVGAECAAND IPFFLEPIAY DDTVGDEKSF
EFALVKPKYV TAYMAEFSKP QYGVDVLKVE VPVNVKFVEG MRVFSGQKAY SREEAKEYFR
QAADAARKPF IYLSAGVSDE VFRETLELAA EAGTPFAGVL CGRATWQDGI PVYAQQGLAA
LEAWLEDRGV ANITALNETL AKGAKPWWTI YGGLENIEVV DLPVVN
|
|---|
| |