Gene Cagg_3308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3308 
Symbol 
ID7267782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4004679 
End bp4005494 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content60% 
IMG OID643568119 
ProductABC transporter related 
Protein accessionYP_002464592 
Protein GI219850159 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4559] ABC-type hemin transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.069398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00117724 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAACTGT TGGTTGCACA ACACGTTGGG TACCGTATCG ACGGGCGCTG GCTGGTGCAA 
GACGTCTCCC TGAGCTTGTC CGCCGGCGAG GTGGTGGCTC TCGTCGGGCC AAACGGTGCC
GGCAAGAGTA CGTTATTAAG CTTGCTGGCC GGTGATTGGC CGCCAACCAC CGGGACGATC
CGACTAGAAG GTCAAGAATT GGGTCGGCTA TCGGCAACGG CACAAGCCCG ACGACGTGCT
GTGTTGCGTC AGCAGGTTGT CGTTACCTTT CCTTTCACCG CGCTTGAAGT GGTTCTCATG
GGTCGCGCGC CGCATCTTCG TGGGCAACGG GAAGGTGAAC ACGATCTCGC CATTGCCCGT
GACGCAATGG CCCAAACTGA GACGGCTACG TTTGCTCTGC GCTCGTTGCC AACCCTCTCC
GGCGGCGAGC AGGCACGTGT CCAGCTCGCG CGTGTTCTGG CTCAAACGAC CCCCGTCCTG
CTTCTCGACG AACCAACCGC AGCCCTCGAT TTACGTCACC AACACCGCGT GTTACACCTG
GCCCGGCAAG CAGCCGCTCA GGGAGGCGCC GCTCTGATCG TGCTGCACGA TGTGAATCTG
GCTGCCTTGT ACGCCGACCG GATCGGAGTG ATGCATCAGG GCCGTTTGTG CGCTATCGGG
AGACCATGGG ATGTCTTGCA AGCTACCCTG CTCAGCGACG TGTACGGTGT GCCGATCAAG
GTTCAACAAC ATCCCCATAC GGCAGCACCT CTTGTGCTTA GTCTACCGGA GCATAGTACA
GGGAGTTCCG TTACCTATGG TATCGAAGTT CACTAA
 
Protein sequence
MELLVAQHVG YRIDGRWLVQ DVSLSLSAGE VVALVGPNGA GKSTLLSLLA GDWPPTTGTI 
RLEGQELGRL SATAQARRRA VLRQQVVVTF PFTALEVVLM GRAPHLRGQR EGEHDLAIAR
DAMAQTETAT FALRSLPTLS GGEQARVQLA RVLAQTTPVL LLDEPTAALD LRHQHRVLHL
ARQAAAQGGA ALIVLHDVNL AALYADRIGV MHQGRLCAIG RPWDVLQATL LSDVYGVPIK
VQQHPHTAAP LVLSLPEHST GSSVTYGIEV H