| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3307 |
|---|
| Symbol | |
|---|
| ID | 7267781 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 4003625 |
|---|
| End bp | 4004698 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643568118 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_002464591 |
|---|
| Protein GI | 219850158 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4558] ABC-type hemin transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.182474 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00128182 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTATCGA AGTTCACTAA GCCGCTTATT GTGCTGGTTT TGCTCGCACT TCTTAGTGCA
TGTGGTGCGA ATCCCGGCGC TAATGCGCCG ACCACCGCGC CTGCACCGAC CACCGCGCCT
GCGCCGACCA CCGCGCCTGC GCCGACCACC GCACCTGCGC CGACCACCGC GCCCGTTGTG
GTACCCACCA CCCGACCCGC CTCAACCGTC GAACCGATAC TGCCGGCTAC CGTCACCGAT
TATCAAGGCG AAACGGTTGT TATCGAGTCG GTTGAACGGA TTGTGAGTTT GTCCGGTGAT
ATAACTGAGA TCATCTTTGC ACTTGGCATG GGTGATAACA TTGTCGGGGT TGATATTAGC
GCGACGTATC CCGCCGATAA AGTGAAGGCC CTTCCTAGTA TCGGCTATCA GCGCCGCCTG
AACGCCGAAG GTATTCTGTC GCTCAATCCG ACCGTCGTGA TCGGTACCGA GTCGGCCGGT
CCACCGGAAG CGTTGGCACA AGTGCGGGCA GCCGGGATAC CAATTGCCCT CACTGCCGCC
CCTCCAACGC TTGAATCGCC TATCCAGAAG ATCCTCTTCG TGGCGCGTGC ATTAGGTATT
CCACAACGCG GCTACGAACT GGCCGGACAG GTTGAGGCCG ATATTGCCCG TGCTCGTGCC
GAAGCTAGCT CCTTGACGCG CCAACCACGG GTCCTCTTCC TGTATTTGCG CGGTACCGAT
GTACAGCAAG TGGCCGGCGC CAATACATCG ATTGATGCAA TGATAACGGC TGCCGGTGGT
ATCAATGCCG GTGCCGAAGT TGGGATTGTC AATTATGCGC CGTTGAGCGC AGAAGTGGTG
ATCGCTGCCC AACCTGATGT GATACTCGTC CTTACAAAGG GTCTTGAATC GGTCGGCGGT
ATCGATGGAC TCCTCAAGAT TCCCGGTCTG GCCGATACAC CTGCCGGTCA ACAACGACGA
GTTATCGATT TCGATGATCT CTATCTGAAC GGAATGGGAC CACGCACCGG TCAGGCGCTG
GCCGATCTCG TCGCTGCGTT TCGCGATGCA GTTGCTCAGA AGGAGGGTTC ATGA
|
|---|
| Protein sequence | MVSKFTKPLI VLVLLALLSA CGANPGANAP TTAPAPTTAP APTTAPAPTT APAPTTAPVV
VPTTRPASTV EPILPATVTD YQGETVVIES VERIVSLSGD ITEIIFALGM GDNIVGVDIS
ATYPADKVKA LPSIGYQRRL NAEGILSLNP TVVIGTESAG PPEALAQVRA AGIPIALTAA
PPTLESPIQK ILFVARALGI PQRGYELAGQ VEADIARARA EASSLTRQPR VLFLYLRGTD
VQQVAGANTS IDAMITAAGG INAGAEVGIV NYAPLSAEVV IAAQPDVILV LTKGLESVGG
IDGLLKIPGL ADTPAGQQRR VIDFDDLYLN GMGPRTGQAL ADLVAAFRDA VAQKEGS
|
|---|
| |