Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3260 |
Symbol | |
ID | 7267407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 3951517 |
End bp | 3953388 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643568081 |
Product | ABC transporter related |
Protein accession | YP_002464554 |
Protein GI | 219850121 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGAAC CTCCACGTGG TCGTCCGCGA CCGCTTCCGA CCCCTACTCG CCCACAGACG TTGCGACAAT GGTTGGAAGA GACGCGCCGG GCGTTGCGGA ATATCCCGGC GTCGTTTCGG TTAGTGTGGC AGGCCGATCG CCGACATACC GTGGTGATGG CGATGATTAC GTTGCTCAAC GCCGGGTTGC CGTTGGCGCA GGCGTATGTC GGTAAGTTGA TTGTGGATGC CGTGGTTGCT GCGGTGCAGG GTGGAGTTGA TGCGATCGGT GGCGTGCAGC AGGCCTTGCC GTGGTTGTTG AGTGAATTTG GTCTGATCAC GTTGGGGGCC GTGTTGATGC AAGGACGGTC GTTGAGCGAA CACATCTTGC ATGCCCGTTT GAGCAATCTG GTCAATCTGT TGATTATGCG GAAGGCACTG CTGCTCGATC TGCATTATTT TGAAGATGCG CAATACTATG ACAAATTGCA GAATGCGCGC CGCGAGACAA ATTGGCGGGC GATGGCGATG GTCAACACCG TATTTAGCGC TATTCAGCAA GGGTTGACCT TGATCTCGTT TGCAGCCAGT TTGCTTTGGT TTAGTCCGTT GATTGCATTG ATATTATTTG GGGCTACGAT CCCGGCTTTT CTCGCGCAAA CCCATTTTAG TCGGCTGCGT TTTCGGCTGC TCACGTGGCG GGCGCCGGAG TTTCGCCGGA TGCAGTACCT TGAACATCTC TTGACGGTGG ATACGGCAGT GAAAGAGGTC AAGTTGTTTG CGCTCGGTGA GCCGTTGTTG CAGCGTCACC AAGCGTTGTT TCATCACTTC TTTCACGAAG ATGAGGTGTT GGCACGGAAG CGTTCGTTGA TCAGTATGCT GTGGGGAGTA GTCGCGAGCG CCGGCTATTA TGTGGCCTAT GGATGGATCA TCTGGCAGAC GGTGGCCGGG GTGATTACCA TTGGTGGAAT GACCTTCTAC CTCACCCTTT TTCGGCAGAG TCAATCGGTG GTGCAAACGC TGTTTGCTAA TCTGAGCCAA TTGTACGAGG GCGGACTGTT TTTGACGAAT CTCTTTGATT TTTTAGCGCT TGAGCCGCGG ATGCAAGAGG GCCGTAATCT CCCGGTGCCA CGTCCGATTC GGTGGGGAAT TGAGTTTCGG AATGTGAGCT TTCGTTATCC TGATCGCGAC GAATGGGCGT TGCGCGAGAT CAATCTGCGG ATAGCGCCGG GTGAAAAGAT TGCATTGGTT GGCGCGAATG GGGCCGGCAA GACGACGTTG ATTAAGCTAT TGACCCGTTT GTACGACCCG ACCGAAGGCC AGATTTTGCT CGACGGGGTT GATCTGCGCG ATTACAATGT TGATGAACTG CGGCAACGGA TTGGTGTCAT TTTTCAAGAT TTTGTACGCT ATCAGACGAC TGCCCGTGAG AATATCGGGT TTGGCCAGAT CGACGAATTA GCGAACGAAC CGCGCATTCG CTCGGCGGCG GTGCGAGGCG GGGCCGATGA GGTGTTGTCA CAACTGCCCC ACGGCTATGA TACGATGCTA GGGCGGTGGT TTGAGAACGG GGCCGAGCTG TCCGGCGGAC AATGGCAGAA GATTGCGTTA GCCAGAGCTT TTATGCGCGA GAGCGAAGTA TTGGTGCTCG ATGAGCCGAC GGCGGCGCTC GATGCTGAAC GCGAGTATGA GATTTTTCAA CGCTTTCGCG ATCTGACTGC CGGTAGGATT GCCGTCCTGA TCAGCCACCG CTTTTCGACC GTGCGCATGG CCGACCGGAT TGTGGTGCTC GAACATGGCC GGATCACCGA AATGGGAACC CATGAGGAGT TGTTAGCCCG CGGCGGGATG TATGCCCGTT TGTTCAATAT GCAGGCCGAA GGCTATCGTT GA
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Protein sequence | MTEPPRGRPR PLPTPTRPQT LRQWLEETRR ALRNIPASFR LVWQADRRHT VVMAMITLLN AGLPLAQAYV GKLIVDAVVA AVQGGVDAIG GVQQALPWLL SEFGLITLGA VLMQGRSLSE HILHARLSNL VNLLIMRKAL LLDLHYFEDA QYYDKLQNAR RETNWRAMAM VNTVFSAIQQ GLTLISFAAS LLWFSPLIAL ILFGATIPAF LAQTHFSRLR FRLLTWRAPE FRRMQYLEHL LTVDTAVKEV KLFALGEPLL QRHQALFHHF FHEDEVLARK RSLISMLWGV VASAGYYVAY GWIIWQTVAG VITIGGMTFY LTLFRQSQSV VQTLFANLSQ LYEGGLFLTN LFDFLALEPR MQEGRNLPVP RPIRWGIEFR NVSFRYPDRD EWALREINLR IAPGEKIALV GANGAGKTTL IKLLTRLYDP TEGQILLDGV DLRDYNVDEL RQRIGVIFQD FVRYQTTARE NIGFGQIDEL ANEPRIRSAA VRGGADEVLS QLPHGYDTML GRWFENGAEL SGGQWQKIAL ARAFMRESEV LVLDEPTAAL DAEREYEIFQ RFRDLTAGRI AVLISHRFST VRMADRIVVL EHGRITEMGT HEELLARGGM YARLFNMQAE GYR
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