Gene Cagg_3255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3255 
Symbol 
ID7267402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3943754 
End bp3945151 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content57% 
IMG OID643568076 
ProductDNA repair protein RadA 
Protein accessionYP_002464549 
Protein GI219850116 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1066] Predicted ATP-dependent serine protease 
TIGRFAM ID[TIGR00416] DNA repair protein RadA 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAA CACGTACTAT CTTCGTCTGT CAACAATGTG GTGCTCAGCA GAGTCGCTGG 
ATGGGCAGAT GCCCAGAATG CGGTGCATGG GATAGTTTAG TTGAGCAATT GATCGCTCCT
GCTCGCGCAA CCGGTACCGG TCGCCCGACT GCTCTCGGCC AGAACCAACC CACGCGCCTA
CGCGATATTC CACTGGCCGA TTTTCAACGA TTACCTGTTT ATGCTGAAGA GTTCGCCCGC
GTCCTCGGTG GCGGGTTAGT TCCCGGTTCA GTCGTCTTGA TCGGCGGTGA TCCCGGTGTT
GGAAAATCAA CGTTACTCGG CCAAGTGGCC GCCCATTTTG CTGCCAGCGT TGGCCCGGCC
CTGTACGTCA GCGCCGAAGA GTCGGCTCAA CAGATTCGTA TGCGTGCCGA ACGACTTGGC
CTTACCGCCG ATGACCTCTT CATATTGGCC GAAACGTCAC TCGATTTGAT TATCGAGCAC
ATCCGTACCC TGCGCCCACG TCTGGTGATC GTCGACTCGA TCCAGACCGT TTACCTGCCA
GAATTGACGA GCGCTGCCGG GAGTGTCTCG CAAGTCCGCG AAGGTGCGCT GCGCCTGATG
CAACTGGCGA AAGAGACGGC AATTCCGATA GTGTTAGTCG GTCATGTTAC CAAAGAAGGG
GCAATTGCCG GCCCGCGCGT ACTGGAGCAT ATTGTCGATG TAGTGCTCTA CCTCGAAGGT
GATCGATTTC ACCAATTTCG TCTCTTGCGC GGCGTGAAGA ATCGCTTCGG GAGCACCAAC
GAGGTTGGCG TGTTTGAAAT GGCCGGTGAT GGGTTGCGCG AAGTACGCAA CCCATCACAA
GTCTTTCTTG CCGAACGCAA CACCCACAGT CCCGGCTCCA CCGTCGCCGT GACCCTCGAA
GGGACCCGCC CGTTGCTGGT TGAAGTGCAG GCCCTAACCT CTCATACAGC TAATGCCCAA
CCTCGCCGCA CGACCAATGG CTTTGACCTG AACCGCTTGC TGATGCTGAC CGCCGTGTTG
ATGAAGCGGG TTGGCTTACC GCTGTTTAAT CAAGACCTGT ACGTCAATAT TGTCGGTGGA
CTACGGATCG GTGAACCGGC TGCCGATCTT GCCGTGACAT TGGCAATTGC CTCGTCGTAC
CGCAATCAGC GCATCGACCC CGACGTGGTC TGTCTTGGTG AAGTTGGTCT ATCGGGAGAA
TTGCGTAGCG TGAGCCAGAT CGATCGTCGC CTCAGCGAAG CGGCGAAACT CGGCTTTCGC
CACGCAGTGG TACCGGCCCA TACGACGCTC GAACCCCCCC CCGGTTTGAC AATCACGCCG
GTGCGGTCGC TGACTGAAGC TGTTGAACTC CTCACCCGCA AACCTAACGC ATCGCAGACT
GAAACCGATC AAGGGTGA
 
Protein sequence
MAKTRTIFVC QQCGAQQSRW MGRCPECGAW DSLVEQLIAP ARATGTGRPT ALGQNQPTRL 
RDIPLADFQR LPVYAEEFAR VLGGGLVPGS VVLIGGDPGV GKSTLLGQVA AHFAASVGPA
LYVSAEESAQ QIRMRAERLG LTADDLFILA ETSLDLIIEH IRTLRPRLVI VDSIQTVYLP
ELTSAAGSVS QVREGALRLM QLAKETAIPI VLVGHVTKEG AIAGPRVLEH IVDVVLYLEG
DRFHQFRLLR GVKNRFGSTN EVGVFEMAGD GLREVRNPSQ VFLAERNTHS PGSTVAVTLE
GTRPLLVEVQ ALTSHTANAQ PRRTTNGFDL NRLLMLTAVL MKRVGLPLFN QDLYVNIVGG
LRIGEPAADL AVTLAIASSY RNQRIDPDVV CLGEVGLSGE LRSVSQIDRR LSEAAKLGFR
HAVVPAHTTL EPPPGLTITP VRSLTEAVEL LTRKPNASQT ETDQG