Gene Cagg_3222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3222 
Symbol 
ID7267369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3905758 
End bp3907554 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content56% 
IMG OID643568043 
Productserine/threonine protein kinase with PASTA sensor(s) 
Protein accessionYP_002464516 
Protein GI219850083 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000113845 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0300218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCAC AACTCCTTGA CGGTCGTTAT CAAATCGAAC AATTGCTGGG TGAAGGTGGA 
ATGGCCCGGG TCTATCTGGG CCGTGATCGC CGTCTCCAAC GCCCAGTTGC GATAAAAATT
CCACACCCAC ACCTAATGAC CGACCCGGAT TTCTTGTCCC GGTTTCGGCA TGAAGCCCAC
GCCGCGGCAA TGGTCAGCCA TCCTAACTTA GTTGACATCT ACGATGTCGG TCAGGACGGT
GATCGACATT ATATTGTGAT GGAATACGTT GCCGGCGTTA CGCTGAAGCA GTTAATCAAC
CGGGAAGCAC CGTTCGCTAT TCCACGCGCC GTGCGCATCG GCGAACAGAT CGCACGTGGC
TTGCACGCTG CCCACCGCGC CGGTCTGATT CACCGCGATA TTAAGCCACA AAATATTATC
GTCACCGATG ACGGGCAAGT ACGGATCACC GATTTCGGTG TTGCCAAAAG TCATTTATCG
ACGGCAATGA CCGAAACCGG GATTACGTTG GGCACGGCTG ACTACATTGC GCCTGAGCAA
GCGCAAGGAC ACCCGGCAAC CCCACAATCG GACATTTATG CAGTCGGCGT AGTGCTGTAC
GAAATGCTTA CCGGCCGGCT ACCGTTCACC GGTGATAATC CGGTTGCCGT GGTGATGAAG
CACATCAGCG AACTTCCCCC ACCACCGCGT CGTTATAACC CCCACATCCC GGCGGCCCTC
GAAGCGATCA TTCTGCGGGC ACTCGCCAAA GATCCGGCCC AACGCCAACG CACGGCTCTG
GAGCTGGCCG AGGAATTGCA TAACTACGAA CAACTGATCT CCCAAGCCAC CGTCGTTAAT
CCGCAACTCG AACCGTCACC GGCGCGCATA CCCAACCCAC CACGGTCGGC ACAAATCACC
GCCGCTCGTC CGGTGACGAT TCCTGGCCCT CGGCAAGCTA CAGTACGCAG TTCTCGGCAA
GAAGGCTTGG GATGCGGTGT ATTTTTCGTC GGGATGCTCA TGCTCGTTGG CGTATTGGCC
GTCGTCTTTC TAATCAGTAC CGGGTTTTTT AACAATCTGT TTGTAAACAA CCCAACACGC
CCCGCAACGA CTCTACCGCC CGGAGGTCAA AGCACGACCG ATACCCCTAC ATCGACGCTC
GTTGCGACCA CAACTGTGCC AGACCTCGTG GGGCTAAGCG ACGGCGAAGC ACGTCAACGA
TTAGAACAAA ACCAGCTCCT CCCTGCACCG AGCAGCGAAC ACAACCGTGA TGTACCGCAG
GGGATCGTCA TTACGCAAAA CATACCCCCC GGCACTGTTG TGGAAATCAA CAGCCCGGTA
TCGTACACCG TTAGTTTAGG GCCATTGCTG GTGGAAGTAC CGAATGTGAT CGGTACCCGC
GAAGACATTG CCGCTAATCA ATTGCGCGCC GCCGGCTTTC TCGTGGAGAC TGTTAAGGAA
CCGCATCCAA CGATTGATAC CGGTTTCGTC ATCAGGCAAG CACCGAGTGC TACGCTGCGC
ATTCCACAGG GTGATCCGGT AACGATCTAC GTCAGCTTAG GCGATGTCGT GCGCTTTCCC
GATGTCATCG GTCGCAGCCG TGCCGAGGCA GAAGCCATTT TAGCCAATAC GCCGGGTATC
ATCCTCGTAT TTGTCGATGT GCAAGGACGT GATCGTATTC CCGACTTTGA CCGCTATGCA
CCGAATCAAG TTGTGAGCGC CGCCCGCGAA GCCGGGAGCA GTTACATTGG CCTCAACAAC
GGTGATTATA TTCCACGTGG CAGTCGGATC ATCCTGGGGG TGAGAGCAGA GGAATAG
 
Protein sequence
MQPQLLDGRY QIEQLLGEGG MARVYLGRDR RLQRPVAIKI PHPHLMTDPD FLSRFRHEAH 
AAAMVSHPNL VDIYDVGQDG DRHYIVMEYV AGVTLKQLIN REAPFAIPRA VRIGEQIARG
LHAAHRAGLI HRDIKPQNII VTDDGQVRIT DFGVAKSHLS TAMTETGITL GTADYIAPEQ
AQGHPATPQS DIYAVGVVLY EMLTGRLPFT GDNPVAVVMK HISELPPPPR RYNPHIPAAL
EAIILRALAK DPAQRQRTAL ELAEELHNYE QLISQATVVN PQLEPSPARI PNPPRSAQIT
AARPVTIPGP RQATVRSSRQ EGLGCGVFFV GMLMLVGVLA VVFLISTGFF NNLFVNNPTR
PATTLPPGGQ STTDTPTSTL VATTTVPDLV GLSDGEARQR LEQNQLLPAP SSEHNRDVPQ
GIVITQNIPP GTVVEINSPV SYTVSLGPLL VEVPNVIGTR EDIAANQLRA AGFLVETVKE
PHPTIDTGFV IRQAPSATLR IPQGDPVTIY VSLGDVVRFP DVIGRSRAEA EAILANTPGI
ILVFVDVQGR DRIPDFDRYA PNQVVSAARE AGSSYIGLNN GDYIPRGSRI ILGVRAEE