Gene Cagg_3220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3220 
Symbol 
ID7267367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3904641 
End bp3905348 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content56% 
IMG OID643568041 
ProductABC transporter related 
Protein accessionYP_002464514 
Protein GI219850081 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000135458 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0828287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATAC TTGACAAAAC TGTCATCCGG TGTGATCGGG TTACGAAAAC CTATACCGAG 
GGCGATGTGC AGCGCACGGT ACTGCACGAC ATCACGATCA CGGTCACTGC CGGTGAGTTC
GTTGTGTTGC TCGGCAAGAG TGGTAGTGGG AAAAGCACCC TGCTGAATCT GGTGAGCGGG
ATCGATACCC CCACATCGGG GACGATCTGG GTGGCCGGTC AGCGGCTCGA TCAGCTTAGT
GAACGTGAAC GAACGCTGTT TCGCCGTCGT TCCATCGGGT TTGTGTTTCA ATTCTACAAC
CTTGCCCCCA CGCTGACGGC ATTGGAAAAT GTTCTGTTAC CGCTGGAGTT GAACGGTCAA
CGCGGTGTGG CAGCGCGGTC GGCAGCTTTA GCCATGCTCG ATGCGGTCGG ATTGGCCAAT
CGCGCTCATA CCTACCCCGA CCGTCTGAGC GGTGGCGAAC AGCAGCGGGT GGCAATCGCG
CGGGCGCTGG TACATAATCC CGATCTTGTG TTAGCCGATG AACCGACCGG CAATCTGGAT
AGCGACACAG GTGCGCAAGT GCTCGATCTG CTCGATAGGC TTACTCGTCA GGTGGGTAAA
ACTCTCGTGA TGGTGACCCA TAGTCGTGAG ATGATCGGGG TCGCCGACCG GGTCTTGCAA
TTACGCAATG GTCGAATGTT TGAAGAGGCT TCATTGCCAA TACAATGA
 
Protein sequence
MQILDKTVIR CDRVTKTYTE GDVQRTVLHD ITITVTAGEF VVLLGKSGSG KSTLLNLVSG 
IDTPTSGTIW VAGQRLDQLS ERERTLFRRR SIGFVFQFYN LAPTLTALEN VLLPLELNGQ
RGVAARSAAL AMLDAVGLAN RAHTYPDRLS GGEQQRVAIA RALVHNPDLV LADEPTGNLD
SDTGAQVLDL LDRLTRQVGK TLVMVTHSRE MIGVADRVLQ LRNGRMFEEA SLPIQ