Gene Cagg_3187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3187 
Symbol 
ID7269936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3867421 
End bp3868563 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content62% 
IMG OID643568008 
Producttransposase, IS605 OrfB family 
Protein accessionYP_002464481 
Protein GI219850048 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID[TIGR01766] transposase, IS605 OrfB family, central region 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.742933 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGT TTGTCTACAC GTTACGTCCA ACACCTGCTC AAGGAGCGTG TCTTTCTGAG 
ACGGTCGAAA CCTGCCGCCA ACGCTACAAC CACGCTCTGA GCGAGCGCAA GACCGCCTAT
CGGGAGCGTG GCGAGTCCAT CGGCTTTGCG CGCCAATGCG CCAGCCTGCC TATGCTGAAA
CGGGAGGTGC CGCATCTGCA GCGTGTCCAC TCCCAAGTGG TGCAGGATGT CGTGCGTCGA
GGAGACCGCG CGTTTCAAGC GTTCGTTCGG CGGGTGAACG CCGGTGAAAA GGCGGGGTAT
CCGCGCTGCA AAGGGCGGGG CCGATACGAT AGCTTCACCT ATCCCCGGTG GGGCAACGGC
GTCAAGCGGG AGCAGGGACG GCTCGTCCTC TCCAAAATCG GCGCTCTCCG GCTGCACAAC
GATCGCCCGG TTGAGGGCAC GCCAAACATC TGTATCATCG TTCGCAACGC GGATGGATGG
TACGCACATG TCGTGTGTGA CGTTGCACCG TCGCCGCTCC CGCCAACCGG CAGGTCGGTA
GGGATTGATG TTGGACGTGA GTCGTTTGCA ACGCTGTCGA ACGGCGTGCA GATTGCCAAC
CCGCGCTCCT ATCGCACCGC CGAACGCACG CTGAAACAGG CACAACGACG GCTCGCTCGT
CGCGTGAAGG GCAGCAATCG CTCCCGCAAG GCACGCACGT TGCTTGCGAA CGCTCACCTG
AAGGTCAAGC GGGCGCGACG GGACTTCGCC CACACAATCG CCCGCGCACC GGTCAATGAG
GATGACCATA TTGTGGTTGA AAAACTGAAC ATTCGGGGGA TGGTACGGAA CCGTCCCCTT
GCCAAATCGA TCTCCGACGC CGGATGGGGT ATCGTTCTGA ATATCCTGCT CGCCAAGGCT
GCACGTGCTG GGCGAGTCGT GGTGGCAGTC AACCCTGCCG GAACGTCGCA CGTATGCGCG
CACTGTGGCG AGTCCGTTCC CAAACGGCTT GCCGTTCGTT GGCACTCCTG CCCGTATTGT
GGTTGTGCGT TGCACCGCGA TCATAATGCT GCGCTTACTA TCCTAAAGAA GGGCGGGGGC
ACCGCCTTCG GGGAGGCTTT GCCGTTGGGC GGGCCGAAGA ACCGAGAACC CCACAGGCTT
TAG
 
Protein sequence
MKTFVYTLRP TPAQGACLSE TVETCRQRYN HALSERKTAY RERGESIGFA RQCASLPMLK 
REVPHLQRVH SQVVQDVVRR GDRAFQAFVR RVNAGEKAGY PRCKGRGRYD SFTYPRWGNG
VKREQGRLVL SKIGALRLHN DRPVEGTPNI CIIVRNADGW YAHVVCDVAP SPLPPTGRSV
GIDVGRESFA TLSNGVQIAN PRSYRTAERT LKQAQRRLAR RVKGSNRSRK ARTLLANAHL
KVKRARRDFA HTIARAPVNE DDHIVVEKLN IRGMVRNRPL AKSISDAGWG IVLNILLAKA
ARAGRVVVAV NPAGTSHVCA HCGESVPKRL AVRWHSCPYC GCALHRDHNA ALTILKKGGG
TAFGEALPLG GPKNREPHRL