Gene Cagg_3098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3098 
Symbol 
ID7269515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3759626 
End bp3760414 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content56% 
IMG OID643567918 
Productprotein of unknown function DUF990 
Protein accessionYP_002464392 
Protein GI219849959 
COG category[R] General function prediction only 
COG ID[COG3694] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.817104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.988604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCGCT ACCTTCGCCT GTTTGCCCTC TTTGCTCACA ATAGCTTACA AATCGCCCTC 
GAGTATCGAG TCAATTTTGT CACCGCCCTG TTTCAGAGCA CCTTGTGGCT CGCATGGGGT
GTGCTCGGTA CGCTCGTGTT CTTCCAGTTT AGCGGCACGC TCGGCGGCTG GACGTTGCCG
CAAGCGTTGC CGGTTGTCGG TCTCTTTCGT ATCTTCGAGG GCTTGATCGA TGGTATTATG
CGCCCCAACA TTACCCGCAT CGTCGAACAT ATTCAGAAAG GGACACTCGA TTTTGTGTTA
GTCAAGCCGG TTGATAGCCA ATTTATGGCG TCACTGCGCC AGATTAATCT GCTTGTGCTA
CCCGATCTGC TAGTGGGCTT TGGATTGATC GGTTACGGTC TCTGGATGGG GCGGATGTGG
CCGACGCCGC TGCAACTGCT CGCCTTCGCC TTCCTGCTCG CCTGCGGGAT CGTGATGGCA
TACGCGATTT GGATGTTGCT GGTGACAACT GCCTTCTGGC TGGTGCAAGT CGAGAATGTC
ACCGAACTGC TCACTGCCAT CTATGAGACG GGGCGCTTTC CGGTAACGGT CTATAGCCCG
ACGATCCGAT TGGTTTTGAC GTTTATCATC CCAATCGCCT TCCTCACCAC CTTCCCGGCA
GCGGCACTCA TCGGTCTGCT GGATCCGCTC TACCTTGCGC TCGCGCCGGT AGTCGCCGGT
GTGTTACTCC TGGCGTCGCG CTTGTTTTGG CGTGTTGGAC TACGCTCATA CACGAGCGCC
TCATCATAA
 
Protein sequence
MLRYLRLFAL FAHNSLQIAL EYRVNFVTAL FQSTLWLAWG VLGTLVFFQF SGTLGGWTLP 
QALPVVGLFR IFEGLIDGIM RPNITRIVEH IQKGTLDFVL VKPVDSQFMA SLRQINLLVL
PDLLVGFGLI GYGLWMGRMW PTPLQLLAFA FLLACGIVMA YAIWMLLVTT AFWLVQVENV
TELLTAIYET GRFPVTVYSP TIRLVLTFII PIAFLTTFPA AALIGLLDPL YLALAPVVAG
VLLLASRLFW RVGLRSYTSA SS