Gene Cagg_3093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3093 
Symbol 
ID7269510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3754021 
End bp3755229 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content59% 
IMG OID643567913 
ProductFormyl-CoA transferase 
Protein accessionYP_002464387 
Protein GI219849954 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0159656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.100643 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCGTC AACGTCCACC ACGACCACTC GATGATATCC GTGTGTTGGA ACTAGGTGCG 
TTCTTGGCCG GGCCGTTCTG TGGTCAGTTG CTGGCCGATT TCGGGGCTGA GGTGATTAAG
GTCGAACCAC CCGGTAAGGG CGACCCGATG CGGGAGTGGG GCCGCCATCG TTACAAGGGG
CGCACGTTGT GGTGGCCGGT GTTGGCCCGT AATAAGAAGT CGATCACCAT CGATCTGCGC
ACTCCCGAAG GGCAGGCACT GGTCAAACGG ATCGTTCCTC ACGTTGATAT GGTCCTCGAA
AACTTCCGTC CCGGTACGCT CGAAGCATGG GGACTGGGTT GGGAAGAGTT GAGCGCACTG
AATCCCGGTT TGATCATGAT CCGGGTGAGC GGGTTTGGTC AGACTGGCCC GTACCGCGAT
AAGGCTGGCT TTGGTTCGAT CGGCGAGGCG ATGGGTGGTA TTCGCGCAAT TACCGGCTTC
CCCGACCGCC CACCCACCCG CATTGGTGTT AGCATCGGCG ACTCGCTCGC GGCGACGTTT
GCGACGATCG GCGCGCTCAT CGCCCTCCAC CAGCGCCAGC GCAACGGGCA GGGGCAGGTG
GTGGATATCG GGATTTACGA GGGGGTGCTC GCCCTTATGG AGAGCATGAT CCCCGAATAC
CAGTTGACCG GCCATATTCG TGAACGTACC GGCAATGTAT TACCGAACGT CGCCCCGTCG
AATATCTATC CCACGGCTGA AGGAAGTTGG TTTGTGATCG GTGCCAATGC CGATACGATC
TTTGCCCGGC TGGCCCAAGC CATGGGGCAA CCCGAATTGG CGACCGATCC CCGCTTCGCC
ACCCATAGTG CTCGTGGTGA ACATCAGGCC GAACTCGACG ATCTGATCGC TGCGTGGACG
ATCAATTACA CCGCCGATCA GTTGCAAGCG ATGCTGGACG AATATGGAGT ACCGGCAGGC
CGTATCTACA CCGCTAAAGA GATGCTGAGC GATCCCCATT TTATTGCGCG TCAGTCGATC
ATCGGTGTCC ACGATCCCGA ATTGGGCGAG ATCAAAATGC AGAATGTCGT TCCACGCCTT
GCGGCCACAC CGGGTGGTAT CGATTGGACC GGGCCGGCAC TCGGTGAACA TAACCGCGAG
GTGTTTGTCG ATCTACTTAG GTTGAGCGAA GACGAGGTAG CAGCGTTGCA AGCGAAGCGG
GTGATTTGA
 
Protein sequence
MSRQRPPRPL DDIRVLELGA FLAGPFCGQL LADFGAEVIK VEPPGKGDPM REWGRHRYKG 
RTLWWPVLAR NKKSITIDLR TPEGQALVKR IVPHVDMVLE NFRPGTLEAW GLGWEELSAL
NPGLIMIRVS GFGQTGPYRD KAGFGSIGEA MGGIRAITGF PDRPPTRIGV SIGDSLAATF
ATIGALIALH QRQRNGQGQV VDIGIYEGVL ALMESMIPEY QLTGHIRERT GNVLPNVAPS
NIYPTAEGSW FVIGANADTI FARLAQAMGQ PELATDPRFA THSARGEHQA ELDDLIAAWT
INYTADQLQA MLDEYGVPAG RIYTAKEMLS DPHFIARQSI IGVHDPELGE IKMQNVVPRL
AATPGGIDWT GPALGEHNRE VFVDLLRLSE DEVAALQAKR VI