Gene Cagg_3084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3084 
SymbolgidB 
ID7269501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3744844 
End bp3745560 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content55% 
IMG OID643567904 
Product16S rRNA methyltransferase GidB 
Protein accessionYP_002464378 
Protein GI219849945 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 
TIGRFAM ID[TIGR00138] 16S rRNA methyltransferase GidB 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.247732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000260442 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACCGGCA ACACCGAACG GTTGCTGATT GAAACGACCA CCGCGTGGGG TATTCCGCTC 
TCCGAACATC AATATGCTCA GTTTCAGCGC TACCTCGATG AGCTGATCAT CTGGAATGAC
CGTTTCAACC TAACGGCAAT ACGCGACCGT TCGGCGATGA TCCGACGGCA CTTGCTCGAC
TCACTCTATT TAGCCCGCGA TTGGCAAACA GCGCCGGCCA ATTTGATCGA CATAGGCAGT
GGCGCCGGAT TTCCGGCCTT ACCCCTTAAA ATTGCCTATC CAACTCTGCC GGTTACCTTA
GTTGAAGCTA CCGGTAAGAA GGCCGAATTT CTGCGTCACG TCATTGAATG CCTTGAGCTG
ACCGATGTGC GTGTGCTGCA TGAGCGGATC GAAACGGTCG GGCGTAATTT GGCCGAACGT
GAGCAGTATG AGGTAGTGAC TGCCCGCGCA GTAGCCGAAT TGCGCGTATT AGTCGAATAT
GCGCTTCCAT TATTACGAAT AGGTGGGCGC TTACTTGCCC CAAAAGGCCG TGATCCGACC
GACGAAATTG CAGCAGCACA GCGCGCCCTG CACGTACTTG GCGGTGAAGT GAGTGCATGT
GAGCCGGTAC ATATCCCCGG CGAGGAGCCA CGTAGTCTCG TTATCATCAC CAAAATTGCC
CCCACGCCAT CACGCTTCCC ACGTGCAATC GGCATCCCAG CTCGTCGGCC ACTGTAG
 
Protein sequence
MTGNTERLLI ETTTAWGIPL SEHQYAQFQR YLDELIIWND RFNLTAIRDR SAMIRRHLLD 
SLYLARDWQT APANLIDIGS GAGFPALPLK IAYPTLPVTL VEATGKKAEF LRHVIECLEL
TDVRVLHERI ETVGRNLAER EQYEVVTARA VAELRVLVEY ALPLLRIGGR LLAPKGRDPT
DEIAAAQRAL HVLGGEVSAC EPVHIPGEEP RSLVIITKIA PTPSRFPRAI GIPARRPL