Gene Cagg_3061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3061 
Symbol 
ID7269478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3723721 
End bp3724281 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content47% 
IMG OID643567881 
ProductTripartite ATP-independent periplasmic transporter DctQ component 
Protein accessionYP_002464355 
Protein GI219849922 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.287187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value8.1525e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCAAGCAC TGTTGCGTCT GTCACGCATT ATCGACACCT TCACCGAATG GGTTGGGCGC 
TTAGCGTATA TTTTGGTGCC GGTTGTGGTG GCCGTTGGGG TATGGAATGT GGCGAATCGC
TATGTTGGTC GTGCGATCGG TCGTACCCTC GGATCCAACT TCTACATTGA AGCCCAATGG
TATATCTTTT CGCTGATTTT CTTGCTCGGT GCAGCCTATG CGCTGAAGCA TAATGAGCAT
GTACGGGTTG ATGTGTTCTA CAGTAATTTT TCTGCTAAGC GTAAGGCTCT TGTGAATTTG
CTCGGTACTA TCTTCTTTTT GATCCCATTC TGTGTGCTTC TCCTCTATTT TGGTTGGCCG
TATGTTGAAC AATCGTGGCG TATTCGCGAA AACTCACCCG ATCCAGGCGG TTTGCCACGT
TATATTATCA AGACCTTCCT CTTGATTAGC CCTGCGCTGC TGATTATCCA AGGTATATCA
GAAGCAATCA AATATTTTGC TGCGTATCGC GGGTTGCTTG ACCCAAGCCA AGTTGAAGAA
GAACACGAAA CGCGATTGTA A
 
Protein sequence
MQALLRLSRI IDTFTEWVGR LAYILVPVVV AVGVWNVANR YVGRAIGRTL GSNFYIEAQW 
YIFSLIFLLG AAYALKHNEH VRVDVFYSNF SAKRKALVNL LGTIFFLIPF CVLLLYFGWP
YVEQSWRIRE NSPDPGGLPR YIIKTFLLIS PALLIIQGIS EAIKYFAAYR GLLDPSQVEE
EHETRL