| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3060 |
|---|
| Symbol | |
|---|
| ID | 7269477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 3721659 |
|---|
| End bp | 3723494 |
|---|
| Gene Length | 1836 bp |
|---|
| Protein Length | 611 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643567880 |
|---|
| Product | phosphoenolpyruvate carboxykinase |
|---|
| Protein accession | YP_002464354 |
|---|
| Protein GI | 219849921 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1274] Phosphoenolpyruvate carboxykinase (GTP) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000135199 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTTCC CTACATACAT CAGGCACCAT CGGCTCCGCG CGTGGATTAA AGAGATCGTC
GAACACTGTG AGCCGGCGCG AATTCACTTC TGTGATGGAA CGCAAGCCGA GTACGATATG
CTCTGCAACC AGATGGTTGA AACAGGTACC TTCATCCGCC TCAATCCGAA GCTTCGCCCC
AACAGTTTTC TTGCCCGCTC TGATCCTTCA GATGTTGCTC GTGTCGAAGA TCGCACGTTT
ATTTGCAGTG TCTCGAAGGA TGATGCCGGT CCAACCAACA ATTGGATGGC CCCGAAAGAG
ATGAAAGAAA TCTTGCTGAA GCTGTTCAAG GGCAGCATGC GTGGGCGAAC AATGTATGTG
ATCCCGTTCA GTATGGGACC GATCGGTTCG CCAATCGCTC ATATTGGTAT TCAGTTGACC
GACTCTCCCT ATGTCGTCGT CAATATGCAT ATTATGACCC GTGTCTCAAC CAAGATTTAT
GATGTCTTGG GCGAGGATGG TGACTATATT CCATGCCTAC ACAGCGTCGG GATGCCGCTT
GAGGTGGGCC AGCCTGATGT ACCGTGGCCG TGCAATCCGA CCAAGTATAT AGTTCACTTC
CCCGAAGAGC GCTCGATCTG GAGTTTTGGA TCCGGCTACG GAGGCAATGC TCTACTCGGG
AAGAAGTGTT TTGCGCTGCG GATCGCATCA GTTATGGCCC GTCAAGAGGG TTGGTTGGCC
GAACATATGT TAATCTTAGG GGTCAAGGAG CCAAGTGGAC GAAAGACGTA TGTGGCTGCT
GCGTTCCCCT CGGCGTGTGG TAAGACCAAC TTCGCTATGT TAATCCCACC GGAGGAGTTC
AAGCAGGCAG GGTGGGAAGT GACCACGGTT GGTGATGATA TTGCATGGAT TAAACCTGGC
CCAGATGGCA AGCTCTATGC AATTAATCCT GAAGCCGGCT ATTTCGGTGT GGCGCCGGGT
ACATCATACA AAACGAACCC CAATGCGATG GAGAGTTGCC GGGCCAATAG CATCTTTACC
AACGTAGCCT TAACCGATGA TGGTGATGTC TGGTGGGAAG GAATGACCGA TGAGCCACCG
GCCCATCTGA TCGACTGGCA AGGTCGTGAT TGGACGCCGG GTTGTGGTCG GTTGGCCGCC
CATCCTAATG CTCGCTTCAC GGCCCCGGCT CGCCAAAACC CGGCTATCGA TCCTGAGTGG
GAAAATCCGA ATGGCGTGCC GATTGAAGCC TTCATCTTCG GTGGGCGACG CAGTCGCACC
GTTCCGCTGG TGTATCAGGC CTTCAACTGG ACGTATGGCG TGTATCTGGC AGCGACGATG
GGTTCGGAAA CAACGGCTGC GGCGATGGGT CAGCAGGGAA TTGTACGGCG CGATCCATTC
GCTATGCTAC CCTTCATCGG CTACCACATG GGTGATTACT TTAACCACTG GCTGAGCTTT
GGGCGACGCT TGAAGAACCC CCCGCGCATC TTTGGTGTCA ACTGGTTCCG CAAAGATGAA
AACGGTAAGT TCATCTGGCC GGGTTTCGGT GAAAATTTGC GGGTGTTGAA GTGGATCGTT
GAGCGTGCTC ATGGACAAGC AGTCAGTGTT GAGACGCCCA TCGGCTGGGT ACCACGCTAC
GAAGATATCG ATTGGCGTGG TCTTCAGTTT AGCCCCGAAC AGTTCGAACA GGTGATGGAG
TGTAATGTCG CTGAGTGGCA GCAAGAGGTG TTGCTCCACG AAGAGTTGTT CATCAAGCTC
TACGACCGGC TGCCTAAAGA GCTTTTGTCG GTGCGCGATC TCATCCTGTC GAGCCTCTGG
CGGATGCCGG AGAAGTGGGG AGCTACGCAC GAATAA
|
|---|
| Protein sequence | MQFPTYIRHH RLRAWIKEIV EHCEPARIHF CDGTQAEYDM LCNQMVETGT FIRLNPKLRP
NSFLARSDPS DVARVEDRTF ICSVSKDDAG PTNNWMAPKE MKEILLKLFK GSMRGRTMYV
IPFSMGPIGS PIAHIGIQLT DSPYVVVNMH IMTRVSTKIY DVLGEDGDYI PCLHSVGMPL
EVGQPDVPWP CNPTKYIVHF PEERSIWSFG SGYGGNALLG KKCFALRIAS VMARQEGWLA
EHMLILGVKE PSGRKTYVAA AFPSACGKTN FAMLIPPEEF KQAGWEVTTV GDDIAWIKPG
PDGKLYAINP EAGYFGVAPG TSYKTNPNAM ESCRANSIFT NVALTDDGDV WWEGMTDEPP
AHLIDWQGRD WTPGCGRLAA HPNARFTAPA RQNPAIDPEW ENPNGVPIEA FIFGGRRSRT
VPLVYQAFNW TYGVYLAATM GSETTAAAMG QQGIVRRDPF AMLPFIGYHM GDYFNHWLSF
GRRLKNPPRI FGVNWFRKDE NGKFIWPGFG ENLRVLKWIV ERAHGQAVSV ETPIGWVPRY
EDIDWRGLQF SPEQFEQVME CNVAEWQQEV LLHEELFIKL YDRLPKELLS VRDLILSSLW
RMPEKWGATH E
|
|---|
| |